Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5091g00037 ATGACTAAGCTGTCCTATTTACACGAGCCTGGGGTCCTGCAGAACTTAAAATCTAGATATGAATTGAATGAAATATACACTTATACTGGAAATATTTTAATTGCGATAAATCCATTCCAAAGACTACCACATCTCTATGATGCTCACATGATGCAACAATATAAGGGAGCACCGTTTGGAGAACTAAGTCCTCATGTGTTTGCAGTTGCTGATGTTGCATTTAGGGCAATGGTTAATGAAGGAAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGAGATACCTTGCTTACCTAGGTGGTAGGGCTGCTACTGAAGGAAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACAGTTAGGAATAACAACTCCAGCCGTTTTGGAAAATTTGTTGAGATCCAATTCGATAAAAGTGGAAGAATCTCAGGAGCAGCAATTCGAACTTACCTTCTGGAGAGGTCTCGAGTTTGCCAAATTAATGATCCTGAACGCAACTACCACTGCTTCTATCTTCTTTGTGCTGCACCACAGGAGGAAATAGAGAAATACAAATTGGGACCTCCTAAATCATTTCATTACCTTAACCAGTCAAATTGTTATGAACTGGTTGATTCAAGTGATGCTCGTGAGTATCTTGCCACTAGGAGAGCTATGGATATCGTTGGAATAAGCCAAAAAGATCAGGAAGCAATTTTCAGAGTTGTCGCTGCTATCCTTCATCTTGGTAATATTGCTTTTTCTAAAGGAAAAGAAGTTGACTCATCAATTCCCAAAGATGACAAAGCCAAATTCCACCTGGCAACAACTGCCGAGCTTCTCATGTGTAATGCTGATGCCTTGGAAGATGCTTTATGTAAACGTGTGATGATCACCCCTGAAGAAGTTATAAAACGAAGCCTTGATCCCCAGAGTGCAGCAATAAGCAGAGATGGCTTGGCCAAAACAATTTATTCTCGGCTATTTGACTGGCTGGTGGACAAGATTAATAGTTCAATCGGACAGGATCCTAATTCCAAATCTTTGATTGGAGTCCTTGATATCTATGGTTTTGAAAGCTTTAAAACTAACAGTTTTGAGCAGTTTTGCATAAACTTCACCAATGAGAAGTTGCAGCAGCATTTCAATCAGCACGTCTTTAAAATGGAACAAGAAGAATATACAAAGGAACAGATTAATTGGAGCTATATTGAATTTGTTGATAATCAAGATGTCCTGGACCTCATCGAAAAGAAACCTGGAGGAATTATCGCTCTCCTTGATGAAGCTTGCATGTTTCCTAAGTCAACACATGAAACATTTGCTAACAAGCTTTATCAAACATTCAAGAATCACAAGCGCTTTATAAAGCCGAAATTGTCTCGATCAGATTTCACCATTGCTCACTATGCTGGGGAGGTCTTATACCAGTCTAATCAATTTTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTGTTGGGTGCTTCCAAATGTTCCTTTGTAGCAGGACTTTTTCCTCCGCTTCCAGAAGAGACATCTAAATCTTCCAAATTTTCCTCAATTGCATCTCGCTTTAAGCAACAACTACAGTCACTAATGGAAACACTAAACTCTACAGAGCCTCATTACATCAGATGTGTGAAACCAAACAACCTTCTTAAGCCTGCGATATTTGAGAATGCCAACATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGAATCAGTTGTGCAGGCTATCCTACACGTCGTGCTTTCTTTGAATTTATAAATCGATTTGGCCTCCTTGCCCCAGAGGCCATGGAAGGCAACATCGAAGAAAAGGTTGCTTGCCAAAAGATTCTGGAAAAGATGGGGCTAAAAGGGTATCAGATTGGTAAAACAAAAGTATTCCTGAGAGCTGGCCAAATGGCTGAACTGGATGCACGGAGAGCTCAAGTACTCAGCAATGCAGCAAAAATTATCCAACGGCGCGTACGAACCCATCAAGCTCGTAATCATTATCTTTCTTTGCGAAAGATTACCGTATACATGCAGTCTGTATGTAGAGGAAGGCTAGCATGCAAACTCTTTGACAACATGAGAAAGGTGGCTGCTGCTAAGAAAATTCAGAAGAACGTACGCCGATATGAAGCTAGGAAGGCCTATAAAAGACTCCATGCTACAGTACTTACCTTGCAAACGGGTTTAAGGGCAATGGCTGCACGTAAGGAATTCAGATTTAGGAAGCAGTCTAAAGCTGCAATTGCCATCCAGGCTCGGTGGCGATGCCATAAAGCTTCCTCATATTATAAGAGGCTCAAGAAAGCTGCAATAATTACACAATGCAGATGGAGAGGCCGTGTTGCAAGGAGGGAACTTAGGAAGTTAAAAATGGCTGCGAGAGAAACTGGTGCACTTCAAGAAGCAAAGGATAAGCTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAAAGTTTGAGGACCAACCTAGAAGAAGCCAAAGCACAAGAGGTAGCAAAACTGCAGAATTCTTTAAAGGAGATGCAGACTAAAATTGATGAAACCCATGCTTTACTTGCCAAAGAACGAGAAAATGCAAAGAAAGCCGTTGAAGAAGCACCTCCTATTATTCAGGAAACCCAGGTTCTTGTTGAAGACACACAAAAAATTGAATCACTAACGGCAGAAGTTGAGAGCCTGAAGACGTCACTCCAGTCAGAAAAAGAGAGGGCAGATGACTTTGAAAGAAAATACAACCAAGCACAAGTCTCTAGTGAAGAAAGGGGTAAAAAATTAGAAGACACCGAGAAGAAGGTTCGTCTGCTACAAGAATCATTGACCAGGCTAGAAGAGAAGATTACTAATTTAGGATCGGAGAATCAGGTTCTACGTCAACAAGCTGTGTCCATGGCACCTAATAAGTTCCTTTCAGGACGCTCGAGATCTATTATTCAGAGAGGTGCTGAAGGAGGGGTTCATGTCGGAGGGGAAGTAAAGGCACCTTTGGATCTTCATAGCCCATCAATGATTCAGAGGGAACACTATGAAATGGAGGATAGGCCACAAAAGTCACTGAATGAGAAACAGCAGGAGAATCAAGAGTTACTCATCAGATGTATTGCACAACATCTAGGCTTTGCTGGGAACAGACCGATTGCAGCCTGTATCATATACAAATGCCTCTTGCACTGGCGATCCTTTGAAGTAGAGCGTACTAGCGTTTTCGATCGTATTATTCAAACAATTGGCCAAGCAATTGAGACCCAGGATAACAATGATATCTTGGCTTACTGGTTATCGAATGCCTCTACACTTCTCTTGCTACTCCAGCGCACACTCAAGGCAAGTGGTGCCGCCGGAATCACTCCGCAACGCCGTCGTTCTTCATCAGCAACACTATTTGGGAGGATGACACAAAGTTTCCGCGGAGCTCCATCTGGAGTCAACCTTGCCCTAATCAACGGAAGCGGCGGAGTAGATACATTGCGACAAGTTGAAGCCAAGTACCCGGCTCTTCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGCGATAACTTGAAGAAAGAAATATCTCCCTTGCTTGGGTTATGCATCCAGGCACCGAGAACATCCAGAGCAGGCTTGGTTAAAGGGCGCTCTGTTGCAAACACGGAAGCCCAGCGAGCATTGATTGCTCACTGGCAGGGGATAGTGAAGAGCCTCGGGAACTTTCTTAATACTTTAAAAGCGAATCATGTTCCTCCATTTTTAGTTCGGAAGGTGTTCACCCAAATTTTTTCTTTTATCAACGTCCAGCTATTCAACAGTCTTCTTTTAAGACGGGAGTGCTGCTCATTCAGCAATGGGGAATATGTGAAAGCTGGTTTGGCTGAACTGGAGCACTGGTGTTACAAAGCAACGGATGAGTATGCAGGTTTAGCCTGGGATGAGCTCAAACATATCAGGCAGGCCATTGGATTCCTGGTCATACATCAGAAGCCAAAGAAAACGCTGGATGAAATAAGCCATGACCTATGCCCGGTCCTCAGTGTACAGCAGCTGTATCGGATAAGTACCATGTACTGGGATGACAAATACGGCACGCACAGCGTATCCCCCGATGTAATATCCAATATGAGAGTGCTGATGACTGAAGACTCAAATAATGCAGTCAGCAATTCTTTCCTGTTGGATGATGATTCCAGTATCCCATTTTCGGTTGATGACATATCAAAGTCAATGGAGCAAATAGATATCGCGGATATTGAACCGCCACCGCTGATTCGAGAGAACTCTGGCTTTAGTTTCTTGTTGCCACGCATAGATTGA 4386 0.4238 MTKLSYLHEPGVLQNLKSRYELNEIYTYTGNILIAINPFQRLPHLYDAHMMQQYKGAPFGELSPHVFAVADVAFRAMVNEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLGPPKSFHYLNQSNCYELVDSSDAREYLATRRAMDIVGISQKDQEAIFRVVAAILHLGNIAFSKGKEVDSSIPKDDKAKFHLATTAELLMCNADALEDALCKRVMITPEEVIKRSLDPQSAAISRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRSDFTIAHYAGEVLYQSNQFLDKNKDYVVPEHQDLLGASKCSFVAGLFPPLPEETSKSSKFSSIASRFKQQLQSLMETLNSTEPHYIRCVKPNNLLKPAIFENANIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGLLAPEAMEGNIEEKVACQKILEKMGLKGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKIIQRRVRTHQARNHYLSLRKITVYMQSVCRGRLACKLFDNMRKVAAAKKIQKNVRRYEARKAYKRLHATVLTLQTGLRAMAARKEFRFRKQSKAAIAIQARWRCHKASSYYKRLKKAAIITQCRWRGRVARRELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKSLRTNLEEAKAQEVAKLQNSLKEMQTKIDETHALLAKERENAKKAVEEAPPIIQETQVLVEDTQKIESLTAEVESLKTSLQSEKERADDFERKYNQAQVSSEERGKKLEDTEKKVRLLQESLTRLEEKITNLGSENQVLRQQAVSMAPNKFLSGRSRSIIQRGAEGGVHVGGEVKAPLDLHSPSMIQREHYEMEDRPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGQAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGITPQRRRSSSATLFGRMTQSFRGAPSGVNLALINGSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRAGLVKGRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGLAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSVQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDIADIEPPPLIRENSGFSFLLPRID 1461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5091g00037 1461 ProSiteProfiles Myosin motor domain profile. 1 666 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5091g00037 1461 FunFam Myosin heavy chain 186 241 - -
Pral5091g00037 1461 SMART DIL_2 1279 1386 IPR002710 -
Pral5091g00037 1461 Gene3D - 766 816 - -
Pral5091g00037 1461 Gene3D - 668 718 - -
Pral5091g00037 1461 Gene3D - 719 765 - -
Pral5091g00037 1461 PANTHER MYOSIN 1 1392 - -
Pral5091g00037 1461 FunFam unconventional myosin-Va 671 718 - -
Pral5091g00037 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 717 817 IPR027417 -
Pral5091g00037 1461 Gene3D - 186 244 - -
Pral5091g00037 1461 Coils Coil 902 943 - -
Pral5091g00037 1461 Coils Coil 951 985 - -
Pral5091g00037 1461 CDD MYSc_Myo11 10 654 IPR036018 -
Pral5091g00037 1461 Gene3D - 373 557 - -
Pral5091g00037 1461 Pfam DIL domain 1280 1383 IPR002710 -
Pral5091g00037 1461 ProSiteProfiles IQ motif profile. 765 791 IPR000048 GO:0005515
Pral5091g00037 1461 ProSiteProfiles IQ motif profile. 788 817 IPR000048 GO:0005515
Pral5091g00037 1461 FunFam Class V myosin 373 509 - -
Pral5091g00037 1461 Pfam Myosin head (motor domain) 1 654 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5091g00037 1461 CDD MyosinXI_CBD 1046 1427 IPR037975 GO:0007015
Pral5091g00037 1461 FunFam unconventional myosin-Va 719 766 - -
Pral5091g00037 1461 Coils Coil 811 845 - -
Pral5091g00037 1461 Gene3D Myosin VI head, motor domain, U50 subdomain 246 535 - -
Pral5091g00037 1461 SMART iq_5 668 690 IPR000048 GO:0005515
Pral5091g00037 1461 SMART iq_5 716 738 IPR000048 GO:0005515
Pral5091g00037 1461 SMART iq_5 787 809 IPR000048 GO:0005515
Pral5091g00037 1461 SMART iq_5 691 713 IPR000048 GO:0005515
Pral5091g00037 1461 SMART iq_5 764 786 IPR000048 GO:0005515
Pral5091g00037 1461 SMART iq_5 739 761 IPR000048 GO:0005515
Pral5091g00037 1461 Gene3D - 601 664 - -
Pral5091g00037 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 718 IPR027417 -
Pral5091g00037 1461 Coils Coil 850 891 - -
Pral5091g00037 1461 Pfam IQ calmodulin-binding motif 671 689 IPR000048 GO:0005515
Pral5091g00037 1461 Pfam IQ calmodulin-binding motif 719 738 IPR000048 GO:0005515
Pral5091g00037 1461 Pfam IQ calmodulin-binding motif 790 809 IPR000048 GO:0005515
Pral5091g00037 1461 Pfam IQ calmodulin-binding motif 767 786 IPR000048 GO:0005515
Pral5091g00037 1461 ProSiteProfiles IQ motif profile. 669 696 IPR000048 GO:0005515
Pral5091g00037 1461 MobiDBLite consensus disorder prediction 930 950 - -
Pral5091g00037 1461 SMART MYSc_2a 1 667 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5091g00037 1461 ProSiteProfiles Dilute domain profile. 1095 1404 IPR002710 -
Pral5091g00037 1461 Gene3D Kinesin motor domain 1 596 IPR036961 -
Pral5091g00037 1461 FunFam unconventional myosin-Va 767 815 - -
Pral5091g00037 1461 FunFam Myosin 2 246 360 - -
Pral5091g00037 1461 ProSiteProfiles IQ motif profile. 717 746 IPR000048 GO:0005515
Pral5091g00037 1461 ProSiteProfiles IQ motif profile. 740 769 IPR000048 GO:0005515
Pral5091g00037 1461 PRINTS Myosin heavy chain signature 83 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5091g00037 1461 PRINTS Myosin heavy chain signature 26 45 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5091g00037 1461 PRINTS Myosin heavy chain signature 363 391 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5091g00037 1461 PRINTS Myosin heavy chain signature 416 444 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5091g00037 1461 PRINTS Myosin heavy chain signature 130 157 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5091g00037 Pral-Chr5091 208383 219002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5091g00037 1 1461 Myosins gene family AT1G54560 84.074 0.0 2588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5091g00037 K10357 - gmx:100816792 2592.76