Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5091g00033 ATGGCTCCCAATGCTACTCCCAACTCAAGAGCTACCAAGGCCTTCAGCGCTATGAAGGACTTGGGAATTTCTCGTGAAGAAGTAGAACCAGTGTTGAAAGAGCTGTTAAGATTGTATAATAAGAACTGGAAATATATTGAAGAAGATAACTATCGGACGCTTGTAGATGCATACTTTGAGTTTAAGGAAGATAAGGAAGCAAAAGGTAAGGGAAAAAGTCAAATCAGTTATCGTGGTGGAGAAAGACAAATTCAATCATTGGCAGATGAAGATGATGTGCTTTTGTACACCATGGACAACTCAAGACAAATATTATCTGCAGGAGAGAATGAAGCGCCTCTAAATACTTTTGGACGGGAAGTCATTGAATCATCTCAATCTTTGATGAGCAATATGAGACCTAAAATCAGTCCTCAATCATTGAAAATAAGAACTTCCGAGGCAGAAAGCATATCAAAATTGCCAGGCATGGCCGCCATAGATAGACATTCAAATTCCGAGAAAGAATCTTCTGCGAGGCACGGGGACGAACCTGTTGATGAGCCTAGAACTGCTCCTGTTCGAAGAGAAAATCTACCAAATGGACATTATAGGAAAGAGACAATGAAGCCAACAACTGAACATAATAATTTACATCCTGAATCCAGTTCAACAAGTTGCAGAGGTCCGTCAGAGGTTTTGACTGGAAACTATCCGGTCAAGTTGGTGTCTTCTCTTTATCTGGACCTGAACCGTGTCATTAATGATTCTTCATATAATAACAATCCCACGAGCAGCAAGGCTAATATTGACATTGCCTCTTCACCATTTGGAGAAGTGAAAATTTCCTTAAACTGTGACCACGCACTTGGACAGCCAAACTTCAATATTCCAAACTTAAATGCTGTTATGAAGTTCATGGAGGAGAAGTACTTCAAGCCTAGCAATATCATTGGACCCCAATTTTCTATGGTGAATTTATTGAACAGTATGTGTGAGAGTTTCCTTAAATTGGGCATGACTATGAATCAAAAGTGCGCACATCCTGAGTTTAACAATGCAAACAGATTAACAAATGACCCCCAACAAGCTGTTGCTCGAGATGAGAGGAAGCTATTTCAGTTTCTTAGTGACATAACAAAAGGCTCAGAAAAGGTGGAGATATCTTTGATAGATGAGTATGGTAATGGGGAGTTGCCAAAGTTTAATTACATACCACATAATCTAATATATCAGAGTGCTAATGTAAATATTTCACTGGCTCGTATTGCGGATGAAGGTTGCTGCTCAAATTGTATTGGAGATTGTCTTTCTCAATCACTACCTTGTGCATGTGCTCAAGAAACTGGTGGAGAGTTTGCTTACACGATTCAGGGCTTGTTGAAAGACGAATTTCTCACATCTTGCATGTCAATGAAACAGGAACCTCAAGCTCATCAATTGGTGTACTGTGAAGAGTGCCCACTAGAGCGGTCTAAGAATGAATGCATGCCTGAGCAGTGCAAGGGGCATCTGATCAGGAAGTTTATCAAGGAATGTTGGAGGAAATGCGGATGTGACATGCAGTGTGGAAATCGTGTAGTGCAACGAGGTTTGAGATGCAAATTGCAGGTGTTCTTTACCGGTGAAGGAAAAGGTTGGGGCCTTAGAACGCTGGAAGATTTGCCTAGGGGATCCTTTATATGTGAATATGTCGGTGAAATATTAACCAACATGGAGTTGCATGAAAGAATTGTGCACAAAAATGGCAATGACAGACATACGTATCCTGTAACCCTTGATGCAGATTGGGGCTCAGAAGGTGTGTTAAAGGATGAGGAGGCACTGTGTCTAGATGCAACATATAACGGAAATGTTGCCAGGTTTATCAATCATAGATGCTCAGACGCAAATCTGGTTGACATTCCTGTTGAAGTGGAGACACCTGATCGCCATTATTATCATCTTGCCTTCTTTACTAACAGGAATGTGAGAGCTTACGAGGAGTTGACGTGGGATTATGGTATTGACTTTGATGATCATGATCACCCGATCAAAGCATTCCAATGTTGTTGTGGAAGCTCATTCTGCCGCAATAAGAAGCGGAAAGGGAAGCGAAAATTAGCGAAACATGCATGA 2097 0.4106 MAPNATPNSRATKAFSAMKDLGISREEVEPVLKELLRLYNKNWKYIEEDNYRTLVDAYFEFKEDKEAKGKGKSQISYRGGERQIQSLADEDDVLLYTMDNSRQILSAGENEAPLNTFGREVIESSQSLMSNMRPKISPQSLKIRTSEAESISKLPGMAAIDRHSNSEKESSARHGDEPVDEPRTAPVRRENLPNGHYRKETMKPTTEHNNLHPESSSTSCRGPSEVLTGNYPVKLVSSLYLDLNRVINDSSYNNNPTSSKANIDIASSPFGEVKISLNCDHALGQPNFNIPNLNAVMKFMEEKYFKPSNIIGPQFSMVNLLNSMCESFLKLGMTMNQKCAHPEFNNANRLTNDPQQAVARDERKLFQFLSDITKGSEKVEISLIDEYGNGELPKFNYIPHNLIYQSANVNISLARIADEGCCSNCIGDCLSQSLPCACAQETGGEFAYTIQGLLKDEFLTSCMSMKQEPQAHQLVYCEECPLERSKNECMPEQCKGHLIRKFIKECWRKCGCDMQCGNRVVQRGLRCKLQVFFTGEGKGWGLRTLEDLPRGSFICEYVGEILTNMELHERIVHKNGNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVARFINHRCSDANLVDIPVEVETPDRHYYHLAFFTNRNVRAYEELTWDYGIDFDDHDHPIKAFQCCCGSSFCRNKKRKGKRKLAKHA 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5091g00033 698 SUPERFAMILY SET domain 379 684 IPR046341 -
Pral5091g00033 698 SMART set_7 527 667 IPR001214 GO:0005515
Pral5091g00033 698 MobiDBLite consensus disorder prediction 132 147 - -
Pral5091g00033 698 Pfam Pre-SET motif 372 519 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral5091g00033 698 ProSiteProfiles SET domain profile. 527 661 IPR001214 GO:0005515
Pral5091g00033 698 Gene3D - 2 64 IPR043017 -
Pral5091g00033 698 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 694 - -
Pral5091g00033 698 CDD SET_SETDB-like 393 661 - -
Pral5091g00033 698 MobiDBLite consensus disorder prediction 132 224 - -
Pral5091g00033 698 SMART preset_2 369 511 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral5091g00033 698 FunFam SET-domain containing protein lysine methyltransferase family protein 372 686 - -
Pral5091g00033 698 Pfam SET domain 539 661 IPR001214 GO:0005515
Pral5091g00033 698 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 698 IPR025776 -
Pral5091g00033 698 MobiDBLite consensus disorder prediction 208 224 - -
Pral5091g00033 698 Gene3D SET domain 372 686 IPR046341 -
Pral5091g00033 698 MobiDBLite consensus disorder prediction 162 207 - -
Pral5091g00033 698 Pfam Ubiquitin-binding WIYLD domain 8 63 IPR018848 -
Pral5091g00033 698 ProSiteProfiles Pre-SET domain profile. 421 524 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5091g00033 Pral-Chr5091 183184 186860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5091g00033 503 684 C2H2 Transcription Factor Family AT2G23740 41.176 2.47e-32 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral5091g00033 Pre-SET 4.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5091g00033 - - gsj:114402909 893.264