Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5091g00023 ATGCCCCACCTCCCAGTCCTCTCCCCATCCTTCCCCCTCCAACCCTATAATAGTATAATGTGTGAGCAACTCAAAGGGCAGTACCAGTTGTGCCAAGAGATCGGTCGTGGTCGGTTCGGCACCGTCTTCCGCTGCTTCCACTCCGTCTCTAACGATTTCTTCGCCTGTAAAGTCATCGACAAGCGCCTTCTCACCGATTCCATCGACCGCGAGTGCCTCCAGAATGAACCCAAGTACATGGCTCTCCTCTCCCCCCACCCTCATATTCTTCAGATTTTCGACGTCTTCGAGGACGAAGACTTCCTCTCCGTTGTTGTCGAGCTCTGTGAGCCCCTCACTCTCCTCGACCGCATCATAGATCGCCCCTTGCTGGAGACTGAGGCCGCTTCCGTCATGAAGCAGCTCCTAGAAGCGATTGCGCATTGCCATCGTCTCGGCATAGCCCACAGGGACATCAAGCCCGACAATATTTTGTTCGATTCCCAGAATAATCTTAAGGTCGCGGACTTTGGATCGGCTGAGTGGTTCGGCGACGGAGGGACCATGAGCGGGGTGGTGGGGACGCCGCATTATGTGGCGCCGGAGGTGCTGCTGGGAAGACCGTACAACGAGAAAGTAGATGTATGGAGTAGTGGAGTGATATTGTACATAATGTTGTCAGGGATTCCGCCTTTTTACGGAGAATCGGCCGAAGACAGCTTTGAGGCTGTGTTGAGGGCTAATCTGAGGTTTCCGTCTAGAGTTTTCAGGTCCGTGTCTTCTGCTGCTAAGGATCTAATGAGGAAGATGATGTGCAGGGATGCATCCAGGCGATTATCTGCAGAGCAAGCCCTGAGGCACCCTTGGATCCTGAGCGGAGGAGAGGCCACCGATCTGACTTGA 882 0.5408 MPHLPVLSPSFPLQPYNSIMCEQLKGQYQLCQEIGRGRFGTVFRCFHSVSNDFFACKVIDKRLLTDSIDRECLQNEPKYMALLSPHPHILQIFDVFEDEDFLSVVVELCEPLTLLDRIIDRPLLETEAASVMKQLLEAIAHCHRLGIAHRDIKPDNILFDSQNNLKVADFGSAEWFGDGGTMSGVVGTPHYVAPEVLLGRPYNEKVDVWSSGVILYIMLSGIPPFYGESAEDSFEAVLRANLRFPSRVFRSVSSAAKDLMRKMMCRDASRRLSAEQALRHPWILSGGEATDLT 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5091g00023 293 FunFam Phosphoenolpyruvate carboxylase kinase 1 20 110 - -
Pral5091g00023 293 CDD STKc_CAMK 27 282 - -
Pral5091g00023 293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Pral5091g00023 293 ProSiteProfiles Protein kinase domain profile. 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5091g00023 293 SMART serkin_6 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5091g00023 293 Gene3D Phosphorylase Kinase; domain 1 12 110 - -
Pral5091g00023 293 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Pral5091g00023 293 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 287 - -
Pral5091g00023 293 SUPERFAMILY Protein kinase-like (PK-like) 17 285 IPR011009 -
Pral5091g00023 293 FunFam Phosphoenolpyruvate carboxylase kinase 2 20 293 - -
Pral5091g00023 293 Gene3D Transferase(Phosphotransferase) domain 1 113 291 - -
Pral5091g00023 293 Pfam Protein kinase domain 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5091g00023 Pral-Chr5091 117663 119682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5091g00023 14 291 EF-hand Containing Proteins AT1G50700 40.426 9.92e-74 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral5091g00023 Pkinase 3.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5091g00023 - K08794 qsa:O6P43_007686 460.299