Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5091g00013 ATGGCTTCTCTCTCTTGCTCCGCCGCTGACCTTGCCCCACTCCTCACCGCCGCCACCAATGCAACCGGTGCTGCCACCTATCTCTGTACCCAACTCGAAGCCATATCCGTCAAGCTAAGCGACACCACCTACGCCGTCAACAACACCTATCTTCTGTTCTCAGCGTATCTGGTGTTCGCCATGCAACTTGGTTTCGCCATGCTGTGCGCCGGTTCCGTGCGAGCCAAGAACACCATGAACATCATGCTCACCAACGTGCTCGATGCCGCTGCCGGCGGTCTCTCTTACTATCTCTTTGGATTTGCCTTCGCATTCGGGTCTCCCTCCAACGGCTTCATCGGTCGCCACTTCTTCGGCCTCCGACACTTCCCTTCTCCGTCCGGAGACTACAGCTTCTTCCTGTATCAATGGGCTTTTGCCATAGCAGCCGCAGGAATCACCAGCGGCTCCATTGCTGAGAGAACCCAATTCGTAGCTTACCTCATCTACTCCTCTTTTCTCACCGGCTTCGTATACCCCGTCGTTTCCCATTGGTTCTGGTCCGCTGACGGATGGGCCAGCCCCACTCGGGCCGGCAGCCTTTTATTTGGGTCCGGTGCCATTGACTTCGCTGGTTCGGGTGTGGTACACATGGTGGGCGGCATAGCAGGGTTGTGGGGTGCTTATCTGGAAGGTCCAAGAATTGGGAGATTCGACCGGACAGGCCGGTCTGTGGCCTTGCGGGGGCACAGCGCTTCCCTCGTTGTGTTGGGAACCTTCTTGTTATGGTTCGGGTGGTACGGGTTTAACCCGGGCTCTTTCCTGACGATCTTGAAGGGATATGGAGGAGGTGGGAGTTATTATGGTCAATGGAGTGCGATAGGTAGAACAGCCGTGACGACGACATTGGCTGGGTGCACGGCAGCGCTGACCACCTTGTTCGGAAAACGCTTGTTGGTGGGACACTGGAACGTGATAGACGTGTGTAACGGGATGCTCGGGGGCTTTGCGGGGATAACGTCCGGGTGCTCCGTGGTAGAGCCATGGGCGGCGATCATATGCGGCTTCGTGGCGGCATGGGTGCTGATTGGGCTGAACAAGCTGGCGGCGAGGGCGGAGTACGACGACCCGCTGGAGGCAGCGCAGCTGCACGGAGGGTGCGGAGCGTGGGGATTGCTGTTCACGGGACTGTTGGCGAAGAAGGAATACGTGGAGGAGGTGTACGGAGGAGGGAGGAAGTACGGGCTGCTGATGGGAGGGGGAGGGAGGCTGATGGCGGCGCAGGTGGTAGGGATAGTGGTAGTGTGCGGGTGGGTGACGGCGACGATGGGGCCGCTGTTCTACGTGCTGAATAAGATGAAGCTGCTGAGGATATCGAGGGAAGACGAGATGGCGGGAATGGATCTGACGAGGCATGGCGGCTTTGCATATGCATACCACGACGAAGAAGAAAGCGTGAGGCCTGGCAGCTTCATGATGGGCAAGATCGAGCCTGCTAACTCCCTCGCCACCACTCCCACCCCGTAG 1506 0.585 MASLSCSAADLAPLLTAATNATGAATYLCTQLEAISVKLSDTTYAVNNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGSPSNGFIGRHFFGLRHFPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASPTRAGSLLFGSGAIDFAGSGVVHMVGGIAGLWGAYLEGPRIGRFDRTGRSVALRGHSASLVVLGTFLLWFGWYGFNPGSFLTILKGYGGGGSYYGQWSAIGRTAVTTTLAGCTAALTTLFGKRLLVGHWNVIDVCNGMLGGFAGITSGCSVVEPWAAIICGFVAAWVLIGLNKLAARAEYDDPLEAAQLHGGCGAWGLLFTGLLAKKEYVEEVYGGGRKYGLLMGGGGRLMAAQVVGIVVVCGWVTATMGPLFYVLNKMKLLRISREDEMAGMDLTRHGGFAYAYHDEEESVRPGSFMMGKIEPANSLATTPTP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5091g00013 501 PANTHER AMMONIUM TRANSPORTER 21 466 - -
Pral5091g00013 501 Gene3D Ammonium transporter AmtB like domains 24 484 IPR029020 -
Pral5091g00013 501 FunFam Ammonium transporter 28 484 - -
Pral5091g00013 501 Pfam Ammonium Transporter Family 50 470 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pral5091g00013 501 SUPERFAMILY Ammonium transporter 44 451 - -
Pral5091g00013 501 NCBIfam ammonium transporter 47 470 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pral5091g00013 501 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5091g00013 Pral-Chr5091 80120 82732 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5091g00013 2 501 Inorganic Solute Cotransporters AT1G64780 78.150 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5091g00013 K03320 K07573 zju:107412282 803.897