Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5091g00001 ATGAGAATAGATGGCCGTATTAAATTGATTGAGAGCTGGTGGTTGTTGACAAACAGATGTGAAGAACCAAAAGTCAGAAACCCAGGCCAAATTGATCCGGCAAGTATAAAAGCGCAACCTTTTACTTTCCGTGAGTTGGCAACCGCAACAAAGAATTTTCGTCGTGGATGCCTGCTGGGTGAAGGCAGCTCTGGCAGAGTCTATAAGGGCACGCTTCCGGCGACCGGCCAGGTGGTAGCTGTGAAGCAACTCGACAAAAACGGGGTGCAAGGCAATAATAAGGAATTTCTGGTCGAGGTTTTGATGCTAAGTCTCTTGCATCACGAAAGTCTAGTCGACCTCATCGGTTATTGTGCCGATGGGGATCAACGTCTTTTGGTTTACGAATTTATCGCAGGGGGTTGCCTGGAAGAACACCTTCTCGAGAACGGACCAAATAAACGTCCATTGGATTGGATGACTAGGATGAAAATAGCGTATAATGCAGCGAGAGGATTGGAGTACTTGCACGACAAGGCTAACCCGCCGGTCATATATCGAGACTTGAAATCCTCAAATATATTGCTGGACGATGACTTTAACCCTAAACTCTCAGATTTTGGGTTGTTCAAGCTTGCCGGGGGACACAAGGCCAACCCCGCGCCTTCTATAGTTATGGGTACCTACGGATACTCGGCCCCAGAGTGCGTAACAACAGGTAACGTCACCTTGAAATCGGATGTGTACAGTTTTGGAGTTATTTTGCTGGAGCTCATTACTGGACGGAGAGCCATCGACACCACGAGACCAAACCACGAACAAAACCTAGTTTCGTGGGCAGTGCCCCTTTTCAAAGACCCAAAAAGATTTCCGGACATGGCGGATCCAGATCTGGAGAGGCATTTTCCAGAAAAGGACCTGAATCAAGCAGTGGCAATAGCAGCCATGTGCCTGCAGGAGGAAGCGGGAGCCCGTCCTTTGATGAGCGACGTCGTAACTGCTCTCAGTTTCCTTACTTTTTTGGATCAAGCTGGAGATAGTTGCGATGAGGAGGATGAAGAGGGGGACTAG 1050 0.4848 MRIDGRIKLIESWWLLTNRCEEPKVRNPGQIDPASIKAQPFTFRELATATKNFRRGCLLGEGSSGRVYKGTLPATGQVVAVKQLDKNGVQGNNKEFLVEVLMLSLLHHESLVDLIGYCADGDQRLLVYEFIAGGCLEEHLLENGPNKRPLDWMTRMKIAYNAARGLEYLHDKANPPVIYRDLKSSNILLDDDFNPKLSDFGLFKLAGGHKANPAPSIVMGTYGYSAPECVTTGNVTLKSDVYSFGVILLELITGRRAIDTTRPNHEQNLVSWAVPLFKDPKRFPDMADPDLERHFPEKDLNQAVAIAAMCLQEEAGARPLMSDVVTALSFLTFLDQAGDSCDEEDEEGD 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5091g00001 349 SUPERFAMILY Protein kinase-like (PK-like) 28 331 IPR011009 -
Pral5091g00001 349 ProSiteProfiles Protein kinase domain profile. 53 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5091g00001 349 CDD STKc_IRAK 59 328 - -
Pral5091g00001 349 SMART serkin_6 53 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5091g00001 349 FunFam probable serine/threonine-protein kinase RLCKVII 26 130 - -
Pral5091g00001 349 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Pral5091g00001 349 Gene3D Transferase(Phosphotransferase) domain 1 132 344 - -
Pral5091g00001 349 PIRSF ILK 29 336 - -
Pral5091g00001 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Pral5091g00001 349 FunFam Serine/threonine-protein kinase PBS1 131 346 - -
Pral5091g00001 349 PANTHER OS07G0668900 PROTEIN 33 333 - -
Pral5091g00001 349 Gene3D Phosphorylase Kinase; domain 1 27 130 - -
Pral5091g00001 349 Pfam Protein kinase domain 57 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5091g00001 Pral-Chr5091 4401 5802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5091g00001 35 331 Glycoside Hydrolase AT3G07070 72.391 4.11e-153 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral5091g00001 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5091g00001 - - qsa:O6P43_007722 484.182