Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5090g00008 ATGAATTGCTTCCCCTGTTTCTCCTCCCGCAGAAGAAAGAAAAGCCGTAACAAGATGGAGCACGATTCCCCACGGCACGAAAACATTCCTTCTACACCGCCCGATGTGAAGAACCAAAAGTCAGAAAACCCAGGCCAAATTGATCCGGCAAGTATAAAAGCGCAACCTTTTACTTTCCGTGAGCTGGCAACCGCAACAAAGAATTTTCGTCGTGGATGCCTGCTGGGTGAAGGCAGCTCTGGCAGAGTCTATAAGGGCACGCTTCCGGCGACCGGCCAGGTGGTAGCTGTGAAGCAACTCGACAAAAACGGGGTGCAAGGCAATAATAAGGAATTTCTGGTCGAGGTTTTGATGCTAAGTCTCTTGCATCACGAAAGTCTAGTCGACCTCATCGGTTATTGTGCCGATGGGGATCAACGTCTTTTGGTTTACGAATTTATCGCAGGGGGTTGCCTGGAAGAACACCTTCTCGAGAACGGACCAAATAAACGTCCATTGGATTGGATGACTAGGATGAAAATAGCGTATAATGCAGCGAGAGGATTGGAGTACTTGCACGACAAGGCTAACCCGCCGGTCATATATCGAGACTTGAAATCCTCAAATATATTGCTGGACGATGACTTTAACCCTAAACTCTCAGATTTTGGGTTGTTCAAGCTTGCCGGGGGACACAAGGCCAACCCCGCGCCTTCTATAGTTATGGGTACCTACGGATACTCGGCCCCAGAGTGCGTAACAACAGGTAACGTCACCTTGAAATCGGACGTGTACAGTTTTGGAGTTATTTTGCTGGAGCTCATTACTGGACGGAGAGCCATCGACACCACGAGACCAAACCACGAACAAAACCTAGTTTCGTGGGCAGTGCCCCTTTTCAAAGACCCAAAAAGATTTCCGGACATGGCGGATCCAGATCTGGAGAGGCATTTTCCAGAAAAGGACCTGAATCAAGCAGTGGCAATAGCAGCCATGTGCCTGCAGGAGGAAGCGGGAGCCCGTCCTTTGATGAGCGACGTCGTAACTGCTCTCAGTTTCCTTACTTTTTTGGATCAAGCTGGAGATAGTTGCGATGAGGAGGATGAAGAGGGGGACTAG 1098 0.4936 MNCFPCFSSRRRKKSRNKMEHDSPRHENIPSTPPDVKNQKSENPGQIDPASIKAQPFTFRELATATKNFRRGCLLGEGSSGRVYKGTLPATGQVVAVKQLDKNGVQGNNKEFLVEVLMLSLLHHESLVDLIGYCADGDQRLLVYEFIAGGCLEEHLLENGPNKRPLDWMTRMKIAYNAARGLEYLHDKANPPVIYRDLKSSNILLDDDFNPKLSDFGLFKLAGGHKANPAPSIVMGTYGYSAPECVTTGNVTLKSDVYSFGVILLELITGRRAIDTTRPNHEQNLVSWAVPLFKDPKRFPDMADPDLERHFPEKDLNQAVAIAAMCLQEEAGARPLMSDVVTALSFLTFLDQAGDSCDEEDEEGD 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5090g00008 365 CDD STKc_IRAK 75 344 - -
Pral5090g00008 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Pral5090g00008 365 Pfam Protein kinase domain 73 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5090g00008 365 FunFam Serine/threonine-protein kinase PBS1 147 362 - -
Pral5090g00008 365 SUPERFAMILY Protein kinase-like (PK-like) 46 347 IPR011009 -
Pral5090g00008 365 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Pral5090g00008 365 MobiDBLite consensus disorder prediction 32 48 - -
Pral5090g00008 365 SMART serkin_6 69 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5090g00008 365 FunFam probable serine/threonine-protein kinase RLCKVII 40 146 - -
Pral5090g00008 365 Gene3D Phosphorylase Kinase; domain 1 39 146 - -
Pral5090g00008 365 ProSiteProfiles Protein kinase domain profile. 69 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5090g00008 365 Gene3D Transferase(Phosphotransferase) domain 1 148 360 - -
Pral5090g00008 365 PANTHER OS07G0668900 PROTEIN 3 349 - -
Pral5090g00008 365 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5090g00008 Pral-Chr5090 55920 57644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5090g00008 1 347 Glycoside Hydrolase AT3G07070 64.146 2.13e-158 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral5090g00008 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5090g00008 - - gmx:100807682 509.605