Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5088g00094 ATGGATCCCATGCCAATGTCCGCCATGAAGATGAAGATGAAGATGAGCTTCTATTGGGGCAAAGATGCCATAGTCCTCTTCTCTAACTGGCCCAACCACAGTCTTGGAATGTATATTTTGGCTATCTTCTTCGTCTTCGTTCTGGCCATTCTCTCTGAACTTGTTTCCAATCAGCCTGCCCTTAAACGTGGGACTAATCCTCTCCTCGCAGGCTTATATAAGGCTGTTTTCCATTTGTTTCATATCAGCTTCTCTTATTTGGTGATGCTGGCTGTTATGTCCTTCAACCTCGGCATCTTCATAGCTGCTGTCGCTGGCCACACCTTGGGATTCTTTATCTCCAAGTATTATCGACATATTGACCAGGCCAACACAGATGATCACAACAGGTCCTCCCTTGTTAATCACAAGGCTTAA 417 0.4508 MDPMPMSAMKMKMKMSFYWGKDAIVLFSNWPNHSLGMYILAIFFVFVLAILSELVSNQPALKRGTNPLLAGLYKAVFHLFHISFSYLVMLAVMSFNLGIFIAAVAGHTLGFFISKYYRHIDQANTDDHNRSSLVNHKA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5088g00094 138 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 5 126 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pral5088g00094 138 Pfam Ctr copper transporter family 67 113 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pral5088g00094 138 Pfam Ctr copper transporter family 15 56 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5088g00094 Pral-Chr5088 858202 858618 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5088g00094 16 134 Inorganic Solute Cotransporters AT5G59030 43.548 8.16e-28 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5088g00094 K14686 - gmx:100808693 164.851