Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5088g00093 ATGGATCACGTGCACATGTCCATGAAAAGCAGCAAGAAGATGAATATGCACATGGTGAGCTTTTATTGGGGAAAAGATGCCACAGTCCTTTTCTCTGGCTGGCCAAACCACAGCCTCGGCATTTACATATTAGCTATCTTCCTCACCTTCCTCCTAGCTCTGCTTTGTGAGCTTTTCTCTAAAAAACCAACCCTAGAACCAGGGACTAGCCATCTCCTTGGAGGGTTGTCCCACTCTGTTTTCTACTTCTTTCATATTGGCTTCCATTATTTGGTGATGCTTGCTGTTATGTCCTTCAACTTTGGCATCTTCATCGCTGCTATAGTTGGCCACACCCTTGGCTTCCTTATCTTCAAGTATCGAGCTATTCACTGCACCAACAAGGCAACAAGGACCCCGGCGTATGATGAAAGACTATTTAGGGCAGAAAACTTCTACAAATAG 444 0.4482 MDHVHMSMKSSKKMNMHMVSFYWGKDATVLFSGWPNHSLGIYILAIFLTFLLALLCELFSKKPTLEPGTSHLLGGLSHSVFYFFHIGFHYLVMLAVMSFNFGIFIAAIVGHTLGFLIFKYRAIHCTNKATRTPAYDERLFRAENFYK 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5088g00093 147 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 8 125 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pral5088g00093 147 Pfam Ctr copper transporter family 74 118 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5088g00093 Pral-Chr5088 856343 856786 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5088g00093 21 138 Inorganic Solute Cotransporters AT3G46900 41.176 8.58e-27 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5088g00093 K14686 - gmx:100808693 130.954