Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5088g00092 ATGGAGATGCATCTGAGTCTGTACTGGGGAAAAGATGCCACAGTCCTCTTCGCTAACTGGCCTAATCGCAGCCTTGGCATGTACATATCATCTATCCTCGTCGTCTTCCTCCTAGCCCTGCTTTGTGAGCTTTTCTCTAAACATCCAACCCTAAAACCACGGACTAGCCCTCTCCTTGGAGGGTTGTCCCACTCTATTTTCTACTTCTTTCATATTGGCTTCCATTACTTGGTGATGCTTGCTGTTATGTCCTTCAACATCGGCATCTTCATAGCTGCTTTGGTTGGCCGCACCCTTGGCTTCCTTATCTTCAACTATCGAGCTATTCACTCATCAGCCAACAAAGACCCCAACGAGTCCTCCGTCCCTTCTTCCCCTAAAGTTTAA 387 0.4755 MEMHLSLYWGKDATVLFANWPNRSLGMYISSILVVFLLALLCELFSKHPTLKPRTSPLLGGLSHSIFYFFHIGFHYLVMLAVMSFNIGIFIAALVGRTLGFLIFNYRAIHSSANKDPNESSVPSSPKV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5088g00092 128 Pfam Ctr copper transporter family 53 104 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pral5088g00092 128 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 115 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5088g00092 Pral-Chr5088 854153 854539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5088g00092 3 119 Inorganic Solute Cotransporters AT5G59040 41.026 3.30e-27 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5088g00092 K14686 - gmx:100527849 133.65