Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5088g00025 ATGACTTGTTCTTCCACCACCACCGTCTCCAAATGCACTGTCTACCCTAGCCAGCCAACTGTATCTTCGCTTCTCGAAAACGGAAAAACAAAAAGAAAAGAAAAGATGCCTTGTTCTTCCACCACCACCGTCTCCAAATGCACTGTCTACCCTAGCCAGCCCTCCTCCCTGGAATCCCTCAAGCTCTCCGTCTCCGACCTCCCCATGCTCTCTTGCCACTACATCCAAAAGGGCATCCTCCTCCCTCCCCCTCCTTTCTCCTTCCCTGACCTTCTCCTCTCTCTTAAGCGCTCTCTTTCTATTACTCTCTCCTTTTTCCCTCCCCTTGCCGGTCGTCTTTTCACCGATTCCGACGGCTATGTCCATATTCAATGCAACGACGCCGGCGTCGAATTCATCCATGCCTCCGCCAAACACCTTGCCACTCACTCCATCCTTTACTCTCCCACACTCACTGACGTCCCTGGCTGCTTCAAGGAGTTCTTCGCTTACAGCAAGACTATCTCCTACACTGGACACACTCTCCCCCTTGTCGCCGTCCAAGTCACTGAGCTTGCTGATGCGGTTTTCATCGGATGCACTGTTAATCATGCCATCGTCGACGGCAGTTCCCTCTGGCATTTCTTCAACACCTTCGCTGAGATCTGCAGAGGAGCGAAAATTTCCGAATTCCCCGAATTCACTCGAGATACCGTTTTCAACTCCTCCGCCGTGCTTAAAGTCCCCGCCGGCGGCCCCAAGGTCACCTTCGACGACGAACAGCCGCTGAGGGAAAGAGTATTCCATTTCAGCAGGGAGGCAATTCAAAAACTTAAGCTCACAGCTAATCAGTATGGCGGGAACGGTGTCACGGATTCTACAGAGTTCGTTGAAAAGAAAGCTAACGGCGAGATAACGCCCGTCACGGCGAACGGGACCGCCCACAAGACGGAAGAGATTTCGTCGTTTCAATCATTATCAGCACAGCTGTGGCGTTCGGTGACACGTGCGAGGAAGTTGGACCCACGCAAAATGTCGACGTTTCGCATGGCGGTGAACTGCCGCCGACGTCTGGAGCCGAAGATGGACGCTTATTACTTCGGGAACGCGATACAGAGCATCCCGACCGTTGCCGAGGTCGGGGAGATTCTGTCTCGGGATCTACGGTGGTGTGCGGATCTGCTGCATAAAAACGTCGTCGCACATGACGACGCTAAGGTGCGGCGCGGCATAGAGGATTGGGAGAAGTCCCCCAGGCTGTTTCCCCTTGGTAACTTCGACGGCGCTTCGATAACCATGGGTAGCTCTCCGCGTTTCCCCATGTACGACAATGACTTTGGGTGGGGCCGACCGTTAGCGATTCGGAGCGGGAAGGCCAACAAATTTGACGGTAAGATCTCTGCGTTTCCGGGGAGGGAAGGAAACGGGAGCGTTGACTTGGAAGTCGTTTTGGCGCCAGAAACGATGGCGGGGCTCGAAAACGACATGGAGTTCATGCAGTACGTAACCTGA 1491 0.5399 MTCSSTTTVSKCTVYPSQPTVSSLLENGKTKRKEKMPCSSTTTVSKCTVYPSQPSSLESLKLSVSDLPMLSCHYIQKGILLPPPPFSFPDLLLSLKRSLSITLSFFPPLAGRLFTDSDGYVHIQCNDAGVEFIHASAKHLATHSILYSPTLTDVPGCFKEFFAYSKTISYTGHTLPLVAVQVTELADAVFIGCTVNHAIVDGSSLWHFFNTFAEICRGAKISEFPEFTRDTVFNSSAVLKVPAGGPKVTFDDEQPLRERVFHFSREAIQKLKLTANQYGGNGVTDSTEFVEKKANGEITPVTANGTAHKTEEISSFQSLSAQLWRSVTRARKLDPRKMSTFRMAVNCRRRLEPKMDAYYFGNAIQSIPTVAEVGEILSRDLRWCADLLHKNVVAHDDAKVRRGIEDWEKSPRLFPLGNFDGASITMGSSPRFPMYDNDFGWGRPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDMEFMQYVT 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5088g00025 496 Gene3D - 42 245 IPR023213 -
Pral5088g00025 496 Gene3D - 246 488 IPR023213 -
Pral5088g00025 496 FunFam Tryptamine hydroxycinnamoyl transferase 245 490 - -
Pral5088g00025 496 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 44 493 - -
Pral5088g00025 496 Pfam Transferase family 42 492 - -
Pral5088g00025 496 SUPERFAMILY CoA-dependent acyltransferases 95 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5088g00025 Pral-Chr5088 387612 389294 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5088g00025 95 486 Monolignol Biosynthesis Gene Families AT5G48930 28.288 2.82e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5088g00025 - - qsa:O6P43_016644 681.789