Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5088g00024 ATGACTTGTTCTTCCACCACCACCGTCTCCAAATGCACTGTCTACCCTAGCCAGCCCTCCTCCCTGGAATCCCTCAAGCTCTCCGTCTCCGACCTCCCCATGCTCTCTTGCCACTACATCCAAAAGGGCATCCTCCTCCCTCCCCCTCCTTTCTCCTTCCCTGACCTTCTCCTCTCTCTTAAGCGCTCTCTTTCTATTACTCTCTCCTTTTTCCCTCCCCTTGCCGGTCGTCTTTTCACCGATTCCGACGGCTATGTCCATATTCAATGCAACGACGCCGGCGTCGAATTCATCCATGCCTCCGCCAAACACCTTGCCACTCACTCCATCCTTTACTCTCCCACACTCACTGACGTCCCTGGCTGCTTCAAGGAGTTCTTCGCTTACAGCAAGACTATCTCCTACACTGGACACACTCTCCCCCTTGTCGCCGTCCAAGTCACTGAGCTTGCTGATGCGGTTTTCATCGGATGCACTGTTAATCATGCCATCGTCGACGGCAGTTCCCTCTGGCATTTCTTCAACACCTTCGCTGAGATCTGCAGAGGAGCGAAAATTTCCGAATTCCCCGAATTCACTCGAGATACCGTTTTCAACTCCTCCGCCGTGCTTAAAGTCCCCGCCGGCGGCCCCAAGGTCACCTTCGACGACGAACAGCCGCTGAGGGAAAGAGTATTCCATTTCAGCAGGGAGGCAATTCAAAAACTTAAGCTCACAGCTAATCAGTATGGCGGGAACGGTGTCACGGATTCTACAGAGTTCGTTGAAAAGAAAGCTAACGGCGAGATAACGCCCGTCACGGCGAACGGGACCGCCCACAAGACGGAAGAGATTTCGTCGTTTCAATCATTATCAGCACAGCTGTGGCGTTCGGTGACACGTGCGAGGAAGTTGGACCCACGCAAAATGTCGACGTTTCGCATGGCGGTGAACTGCCGCCGACGTCTGGAGCCGAAGATGGACGCTTATTACTTCGGGAACGCGATACAGAGCATCCCGACCGTTGCCGAGGTCGGGGAGATTCTGTCTCGGGATCTACGGTGGTGTGCGGATCTGCTGCATAAAAACGTCGTCGCACATGACGACGCTAAGGTGCGGCGCGGCATAGAGGATTGGGAGAAGTCCCCCAGGCTGTTTCCCCTTGGTAACTTCGACGGCGCTTCGATAACCATGGGTAGCTCTCCGCGTTTCCCCATGTACGACAATGACTTTGGGTGGGGCCGACCGTTAGCGATTCGGAGCGGGAAGGCCAACAAATTTGACGGTAAGATCTCTGCGTTTCCGGGGAGGGAAGGAAACGGGAGCGTTGACTTGGAAGTCGTTTTGGCGCCAGAAACGATGGCGGGGCTCGAAAACGACATGGAGTTCATGCAGTACGTAACCTGA 1386 0.5469 MTCSSTTTVSKCTVYPSQPSSLESLKLSVSDLPMLSCHYIQKGILLPPPPFSFPDLLLSLKRSLSITLSFFPPLAGRLFTDSDGYVHIQCNDAGVEFIHASAKHLATHSILYSPTLTDVPGCFKEFFAYSKTISYTGHTLPLVAVQVTELADAVFIGCTVNHAIVDGSSLWHFFNTFAEICRGAKISEFPEFTRDTVFNSSAVLKVPAGGPKVTFDDEQPLRERVFHFSREAIQKLKLTANQYGGNGVTDSTEFVEKKANGEITPVTANGTAHKTEEISSFQSLSAQLWRSVTRARKLDPRKMSTFRMAVNCRRRLEPKMDAYYFGNAIQSIPTVAEVGEILSRDLRWCADLLHKNVVAHDDAKVRRGIEDWEKSPRLFPLGNFDGASITMGSSPRFPMYDNDFGWGRPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDMEFMQYVT 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5088g00024 461 Gene3D - 7 210 IPR023213 -
Pral5088g00024 461 Gene3D - 211 453 IPR023213 -
Pral5088g00024 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 458 - -
Pral5088g00024 461 Pfam Transferase family 7 457 - -
Pral5088g00024 461 SUPERFAMILY CoA-dependent acyltransferases 60 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5088g00024 Pral-Chr5088 387612 389294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5088g00024 60 451 Monolignol Biosynthesis Gene Families AT5G48930 28.288 1.60e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5088g00024 - - qsa:O6P43_016644 680.633