Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5086g00007 ATGAGCCACTATTGGGCAAACTACAGGATTCTAGCATTACGAGTCCTTAGAGGATATCTCTTTTTGTGCATGAGTTCAACATTTAGCTCCGCAACAGCGATGCCACAAGGAAATGAAACTGATTTTCGAGCTTTACTTGACTTCAAGAGTCGGATAATTCAAGATCCATTCAAAATAATGAGTTTGTGGAACAACTCCATCCATCACTGCAAGTGGGTAGGAATCACCTGCAACATCTCCAATGGAAGGGTGGTGCAACTGAGCCTTGGACAACGGAGATTGGCTGGCACAGTTTCACCTTCTATAGGAAACCTCACATTTCTCAGAGAACTCAACCTCAGCTTCAACAGCTTCCATGGTGAGTTTCCTCCTGAAGTGGGACGTCTACTGGACCTTCAAAATCTAAGCATCAGCGGCAATGACTTTGGAGGGAGTATTCCAAGTAATCTAAGTCACTGCAAAGAACTGAGGATTTTATTTGCAGGTAAAAACAATTTCACAGGGAAAATCCCAACTTGGATAGGGAATTTTTCTTCTTTATCCCGGTTAATACTTGCAGGAAACAAATTCCATGGAGGCATACCAAATGAGATAGGCCATTTATCAGGCTTGACAGTTCTCATACTATTTGGGAATTATCTGTCGGGTACAATTCCTTCTTCAATTTACAACATTTCCTCTATATTCTACTTCAGTGTTGCTCAGAACAATCTGCAAGGTAAGATACCACCTGATGTTGGTTTGAGTCTTCCTAACCTTGAAATATTTGCTGGGGGAGCCAACAATTTCACGGGAACTGTTCCTGCATCATTATTAAATGCTTCAAGGCTACAACTTTTTGACTTTTCTGTCAACGCTCTCACTGGAACACTGCCTAAGAACATAGGAGTCTTGAACCGTTTATTTTGGTTCAGCCTTGAAGTCAATAGCCTAGGAGCAATTGGGAAAAATGATGATCATGGCCTAAATTTTCTTCCTTCCCTGGTTAATTGCACTGAACTCAAAGTTTTGGGCCTTGCTCAAAATATGTTTGGAGGAGAATTACCAAGCTCAATTGCTAACTTATCAAGCAAATTAGAAAAACTCACTCTAGGTTCCAATGCATTATATGGAAGCATCCCTAGTGCAGTTGGCAAACTTACTAATTTAGGCATTCTAGGATTTGAAGGAAACCTTCTAGCTGGTAGCGTCCCTGATGGAATAGGTAAGCTCCAAACGTTAGACGGTTTGTATTTGAATGGCAACAAATTTTCAGGAACAATCCCTTCGTCTCTAGGAAACTTAACTTCGTTAACAAGGCTCTTCATGGAGGAAAACAACTTTGAAGGAGGTATACCTTTAAGCCTTGGAAATTGTCAAAAGCTTCTGGTACTAAGTCTTTATAACAACAATCTCAATGGCACGATACCAAAATCAGTGATCGGCATTTCTTCACTTTCAGTGTACTTGGACGTCTCTAATAATGTTTTGACTGGACCTTTACCAGATGAAGTGGGAAATTTACATAATCTGGCGCAATTAGTACTGTCAAACAACAAATTTTCTGGGGTCATTCCTTCTTCTATTGGCAAATGTGTCAGCTTGGAACGGCTGCACTTGCAGGGCAATTTGTTCAAAGGAGAGATTCCTCAGAGTTTGGAGGGATTGAGAGGTTTAGAAGATATAGATCTTTCACGCAACAATTTGTCTGGGACGATTCCTAAATTCCTAAGCAAGTTTAAAGCCCTCAAGCATCTCAATCTATCTTACAATGACCTTGATGGCGAAGTACCAAAGGCAGGGATCTTTATAAATGCAACTTCCACTTCAGTATACGGAAACAGCAAGCTCTGCGGAGGTATCCCAGAATTTAACTTATCTACTTGCACAGCCAGAAAGGCTTCTTCGTCGGGAAAATATCTTGCCCTCAAGGTGTTGATACCTCTTGCTTGCACCCTAGCACTTGTACTCCTTTTTTCATGCTTCATCGCATATTTTTTCGTACTAAAAAGAACAAGAAGGAGATTAGAAGCCAATGCAATCACTACAAAGGATTTTAATTCAGAAATTTCTTACTCAGAACTAGCTAGTTGCACCGGTGGGTTCTCCCAAAATAACTTGATCGGTTCAGGAAGTTTTGGTTCGGTATACAAAGGAACTCTTGCAAGTAATGGAACATATGTCGCAGTAAAAGTATTAAATCTCCAACAAAGAGGAGCTTCAAGGAGTTTCATTGATGAATGCATAGCCCTGAGAAGTATAAGGCATCGAAACCTCCTCAAGATCATAACTGCAACATCAAGCATTGACCACCAAGGTAATGACTTCAAAGCTCTGGTGTTTGAGTTCATGCCTAATGGAAATCTAGACGACTGGATACATCCAAGAGATTATGTGCAACAGGGGAGCAAGAGATTAACATTCATCCAGAGGCTGAACATCGCAATTGATGTTGCTTTTGCATTGGAATATCTCCACCACTTTTGTCAAACACCTATCGTGCATTGCGATGTAAAGTCAAGCAATGTACTCCTTGATGATGATTTGGTAGCCCATGTGGGTGACTTCGGGCTAGCAACCCTTCTATATGAAGAATCAAGCGACTCTTCTTTAGAACACTCAATAATATCAGGCAGCTTAAAGGGTTCAATTGGGTATATTCCTCCAGAGTATGGTTTGGGTGGGCAACCTTCAACACTGGGAGATGTATACAGCTATGGGATATTATTATTGGAGATTTTAACAGGAAAAAGACCCACAAATGATGAATTTGAAGGTGGGATGGGAATTCACCAGTATGTGGCAAGGGCTTTACCCAATTATGCAATGGAGATAGCTGATCGTTCGTTACTATCTGAAAAAGAAGATGAAGATGAAGATATACGCTTAGAGGAGAGAGCAATAAGGAAAGGAAGTGGAAGACGGAGGTTAATAGACGATTGCTTGAGTTCGTTGATGCAGGTGGGAGTATCTTGTTCTGCACATGTGCCATCAGAGAGGCTGCAGTCTATGACTGAGGTTGTTAACAAACTCCAAGCAATCAAAAAATTGTACATCTCCAAATAA 3045 0.4082 MSHYWANYRILALRVLRGYLFLCMSSTFSSATAMPQGNETDFRALLDFKSRIIQDPFKIMSLWNNSIHHCKWVGITCNISNGRVVQLSLGQRRLAGTVSPSIGNLTFLRELNLSFNSFHGEFPPEVGRLLDLQNLSISGNDFGGSIPSNLSHCKELRILFAGKNNFTGKIPTWIGNFSSLSRLILAGNKFHGGIPNEIGHLSGLTVLILFGNYLSGTIPSSIYNISSIFYFSVAQNNLQGKIPPDVGLSLPNLEIFAGGANNFTGTVPASLLNASRLQLFDFSVNALTGTLPKNIGVLNRLFWFSLEVNSLGAIGKNDDHGLNFLPSLVNCTELKVLGLAQNMFGGELPSSIANLSSKLEKLTLGSNALYGSIPSAVGKLTNLGILGFEGNLLAGSVPDGIGKLQTLDGLYLNGNKFSGTIPSSLGNLTSLTRLFMEENNFEGGIPLSLGNCQKLLVLSLYNNNLNGTIPKSVIGISSLSVYLDVSNNVLTGPLPDEVGNLHNLAQLVLSNNKFSGVIPSSIGKCVSLERLHLQGNLFKGEIPQSLEGLRGLEDIDLSRNNLSGTIPKFLSKFKALKHLNLSYNDLDGEVPKAGIFINATSTSVYGNSKLCGGIPEFNLSTCTARKASSSGKYLALKVLIPLACTLALVLLFSCFIAYFFVLKRTRRRLEANAITTKDFNSEISYSELASCTGGFSQNNLIGSGSFGSVYKGTLASNGTYVAVKVLNLQQRGASRSFIDECIALRSIRHRNLLKIITATSSIDHQGNDFKALVFEFMPNGNLDDWIHPRDYVQQGSKRLTFIQRLNIAIDVAFALEYLHHFCQTPIVHCDVKSSNVLLDDDLVAHVGDFGLATLLYEESSDSSLEHSIISGSLKGSIGYIPPEYGLGGQPSTLGDVYSYGILLLEILTGKRPTNDEFEGGMGIHQYVARALPNYAMEIADRSLLSEKEDEDEDIRLEERAIRKGSGRRRLIDDCLSSLMQVGVSCSAHVPSERLQSMTEVVNKLQAIKKLYISK 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5086g00007 1014 Gene3D Ribonuclease Inhibitor 152 245 IPR032675 -
Pral5086g00007 1014 Pfam Leucine rich repeat 527 586 IPR001611 GO:0005515
Pral5086g00007 1014 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Pral5086g00007 1014 FunFam LRR receptor-like serine/threonine-protein kinase EFR 320 628 - -
Pral5086g00007 1014 FunFam LRR receptor-like serine/threonine-protein kinase EFR 666 776 - -
Pral5086g00007 1014 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 196 291 - -
Pral5086g00007 1014 Gene3D Ribonuclease Inhibitor 246 317 IPR032675 -
Pral5086g00007 1014 SUPERFAMILY L domain-like 38 312 - -
Pral5086g00007 1014 Pfam Protein kinase domain 696 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5086g00007 1014 Gene3D Ribonuclease Inhibitor 318 630 IPR032675 -
Pral5086g00007 1014 Gene3D Transferase(Phosphotransferase) domain 1 777 1012 - -
Pral5086g00007 1014 PANTHER OS04G0122200 PROTEIN 57 204 - -
Pral5086g00007 1014 ProSiteProfiles Protein kinase domain profile. 695 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5086g00007 1014 SUPERFAMILY L domain-like 357 612 - -
Pral5086g00007 1014 ProSitePatterns Protein kinases ATP-binding region signature. 701 724 IPR017441 GO:0005524
Pral5086g00007 1014 SUPERFAMILY Protein kinase-like (PK-like) 679 1004 IPR011009 -
Pral5086g00007 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Pral5086g00007 1014 Gene3D Ribonuclease Inhibitor 40 151 IPR032675 -
Pral5086g00007 1014 Gene3D Phosphorylase Kinase; domain 1 675 776 - -
Pral5086g00007 1014 FunFam Leucine-rich repeat receptor-like protein kinase 38 195 - -
Pral5086g00007 1014 SMART serkin_6 695 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5086g00007 1014 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 777 1014 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5086g00007 Pral-Chr5086 39042 42528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5086g00007 38 1011 Receptor kinase-like Gene Family AT3G47570 44.290 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral5086g00007 Pkinase 3.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5086g00007 - - gmx:106794146 1241.1