Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5085g00002 ATGGAAGTTCCAAGAGCAGATTGTGTTGCTCTGGATTGGCCAAAGAGGGCTGCTATCTGCTGTGGTACAGCTTATGGTCTTGAATTTCTTCATGAAGAGGCTCAACCAAGCATTGTTCACAGAGATATCAAGGCTAGCAACATACTGCTTGATGGGAACTTTAATCCTAAAATAGGGGATTTTGGCCTCGCAAAGCTTTTTCCTGACGATGTCACTCATGTTAGTACTCGAGTGGCAGGAACGGTGGGATATCTAGCGCCAGAATATGCACTTCTAGGACAACTTACAAAGAAGGCTGATGTGTACAGTTTCGGGATTCTCATGCTTGAAATAATCAGTGGTAAAAGTAGCAGTAAAGCCGCATTTGGAGATAATCTCTTGGTTCTAGTGGAATGGGCTTGGAAGCTGAGAGAAGAAGGCAGGCTTCTGGATATTGTAGATCCCGAACTAACTGCATACGATGAGACGCAGGTGTTGCGTTTCATTAAGGTTGCTCTGTTCTGTACCCAAGCATCCGCACAACACAGGCCCACCATGAAGCAAGTAATAAAAATGCTCACCAAGGATGTGCATTTGAATGAGAAGGCACTGACCGAACCTGGAGTTTATAGATGGAATAGCTCGAAAGAGTATGGCAATTATTCGTTAAATCAGACATCGTCTTCTCAAATAAACAAGTACAGAAGTTCCAAAAATCCCTACATGACATCAAGCCATTATAGTGGTGCTGATTTGGATACACAGATTCTTCCTAGGTAA 759 0.4321 MEVPRADCVALDWPKRAAICCGTAYGLEFLHEEAQPSIVHRDIKASNILLDGNFNPKIGDFGLAKLFPDDVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGILMLEIISGKSSSKAAFGDNLLVLVEWAWKLREEGRLLDIVDPELTAYDETQVLRFIKVALFCTQASAQHRPTMKQVIKMLTKDVHLNEKALTEPGVYRWNSSKEYGNYSLNQTSSSQINKYRSSKNPYMTSSHYSGADLDTQILPR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5085g00002 252 SMART serkin_6 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5085g00002 252 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 10 223 - -
Pral5085g00002 252 Pfam Protein tyrosine and serine/threonine kinase 11 186 IPR001245 GO:0004672|GO:0006468
Pral5085g00002 252 Gene3D Transferase(Phosphotransferase) domain 1 5 201 - -
Pral5085g00002 252 FunFam Putative LRR receptor-like serine/threonine-protein kinase 3 198 - -
Pral5085g00002 252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 38 50 IPR008271 GO:0004672|GO:0006468
Pral5085g00002 252 MobiDBLite consensus disorder prediction 233 252 - -
Pral5085g00002 252 ProSiteProfiles Protein kinase domain profile. 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5085g00002 252 SUPERFAMILY Protein kinase-like (PK-like) 11 186 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5085g00002 Pral-Chr5085 740 4264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5085g00002 11 237 Receptor kinase-like Gene Family AT1G56120 46.256 2.13e-65 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5085g00002 PK_Tyr_Ser-Thr 2.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5085g00002 - - gmx:100816683 380.563