Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5085g00001 CCTTCTGCAACTTTTTATGTGTGTTTTTTGGGCTTTGTGATGACAGTGATTGCAACTAAAACTTTTAGTTACAATTCAATGAGATCAGCCACAGGAGATTTTCATCCATCTACCAGAATTGGTGGAGGAGGTTATGGAGTTGTCTACAAGGGTGTATTAAGAGATGGTACTCAAGTTGCTATCAAGTCTCTGTCTGTAGAGTCTAAACAAGGAACAAAGGAATTTATGACAGAAACTGAAATTATATCAAAGATACAGCATCCAAACCTTGTGCAACTTATTGGCTGCTGTGTTGAGGGCCACCATCGGTTGTTGGTGTATGAGTTTTTGGGAAAACAATAG 342 0.3889 PSATFYVCFLGFVMTVIATKTFSYNSMRSATGDFHPSTRIGGGGYGVVYKGVLRDGTQVAIKSLSVESKQGTKEFMTETEIISKIQHPNLVQLIGCCVEGHHRLLVYEFLGKQ 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5085g00001 113 ProSitePatterns Protein kinases ATP-binding region signature. 40 62 IPR017441 GO:0005524
Pral5085g00001 113 FunFam Receptor-like serine/threonine-protein kinase At4g25390 10 109 - -
Pral5085g00001 113 Pfam Protein tyrosine and serine/threonine kinase 38 110 IPR001245 GO:0004672|GO:0006468
Pral5085g00001 113 Gene3D Phosphorylase Kinase; domain 1 15 109 - -
Pral5085g00001 113 ProSiteProfiles Protein kinase domain profile. 34 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5085g00001 113 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 110 - -
Pral5085g00001 113 SUPERFAMILY Protein kinase-like (PK-like) 10 111 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5085g00001 Pral-Chr5085 195 693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5085g00001 17 110 Receptor kinase-like Gene Family AT1G53430 54.255 2.50e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5085g00001 PK_Tyr_Ser-Thr 6.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5085g00001 - - gmx:100816683 162.155