Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5082g00144 ATGAATATGATGAGACGACTCAAAAGCATTGCTTCAGGGTGCTCTTCCATTTCATCGGATCCTGGAGGACAGTTTATCACAAAGAGGGTTAAGGTTGATGAAGAAATTGATGGTAAAGTAACTGAGGAAACACATTCTATTAGGAGAGGCAGGACAGATCGGAAGCATAATGTGGATGCATCAAAAAAACCTAGTGTGGATGCATCTAATGCCTCTGTGGTAACCAAAACAGAGAGATTAGATTATCATCAGTTTCCTAATCAGTTGCATGAAATGAAAATTAGGGATACAAAAGTCAACAATCCCATTGAAAAATTTTGTTGTATGCAAGATATAGAGGCGACTATTGTGAGTGGTAATCGAACAGAAGCAGGTCAGGTAATTACTACTGCCATTGGTGGTAAAGACGGACAACCAAAGCAGACAGTCTCATACATGGCAGAACGTGTGGTTGGTACTGGTTCCTTTGGTGTTGTTTTTAAGGCCAAGTGTGTTGAGACTGGTGAAGCAGTTGCCATTAAGAAGGTGTTCCAAGACAAAAGATATAAAAATAGGGAACTCCAGATAATTCGCAAGCTTGACCACCTTAATGTCTGTCAATTAAAGAACTGTTTCTTTTCAACTACTGATAAAGATAAGTTGTTCCTGAACCTAGTTTTGGAGTATGTACCCGAAACTGTCTATAGAGTCTCAAAGCAATATACTAAGATCCACCAGCACATGCCTATCATTTATGTACAGCTGTATACATACCAAATATGCCGTGCATTAAATTATTTGCATAATGTGGTTGGTGTGTGTCATCGTGACATCAAACCCCAGAACTTACTGGTTAATTCCCAGACTCATCAGCTAAAGATGTGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGTGAACCTAACATATCATACATATGCTCGAGGTACTATAGGGCTCCGGAACTTATATTTGGGGCAACAGAGTACACAACTGCTATTGACATATGGTCTGTTGGTTGTGTTTTGGCTGAGCTCCTTCTACGAAAGCCACTGTTTCCGGGAGAAAGTGGGGTTGATCAATTGGTTGAAATCATTAAGATACTAGGTACACCCACAAGAGAAGAAATAAAGTGTATGAATCCCAATTACAAAGAATTTAAGTTCCCTCAGCTTAAAGCACGCCCGTGGCACAAGGTTTTTCACAAGAGACTACCCGAAGAAGCAGTGGATCTCGTGTCAAGACTGCTTCGTTATTCACCAAACCTACGTTGCACTGCTTTAGAAGCATGTGCGCACTCCTTCTTTGATGATCTTAGAGACCCAAATACACGTTTACCCAATGGGCAGCCACTACCTCCACTGTTCAATTTCACTGCTAAGGAACTGGCTGGTGCACCTGCTGAGTTATGTAATCGTCTTATTCCCAAGCACGCCGGGAACTGA 1425 0.4147 MNMMRRLKSIASGCSSISSDPGGQFITKRVKVDEEIDGKVTEETHSIRRGRTDRKHNVDASKKPSVDASNASVVTKTERLDYHQFPNQLHEMKIRDTKVNNPIEKFCCMQDIEATIVSGNRTEAGQVITTAIGGKDGQPKQTVSYMAERVVGTGSFGVVFKAKCVETGEAVAIKKVFQDKRYKNRELQIIRKLDHLNVCQLKNCFFSTTDKDKLFLNLVLEYVPETVYRVSKQYTKIHQHMPIIYVQLYTYQICRALNYLHNVVGVCHRDIKPQNLLVNSQTHQLKMCDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLRKPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYKEFKFPQLKARPWHKVFHKRLPEEAVDLVSRLLRYSPNLRCTALEACAHSFFDDLRDPNTRLPNGQPLPPLFNFTAKELAGAPAELCNRLIPKHAGN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5082g00144 474 Pfam Protein kinase domain 145 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5082g00144 474 FunFam Glycogen synthase kinase-3 beta 129 224 - -
Pral5082g00144 474 ProSiteProfiles Protein kinase domain profile. 145 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5082g00144 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Pral5082g00144 474 MobiDBLite consensus disorder prediction 41 62 - -
Pral5082g00144 474 Gene3D Transferase(Phosphotransferase) domain 1 225 473 - -
Pral5082g00144 474 FunFam Shaggy-related protein kinase kappa 225 473 - -
Pral5082g00144 474 SMART serkin_6 145 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5082g00144 474 ProSitePatterns Protein kinases ATP-binding region signature. 151 175 IPR017441 GO:0005524
Pral5082g00144 474 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 111 472 - -
Pral5082g00144 474 SUPERFAMILY Protein kinase-like (PK-like) 144 454 IPR011009 -
Pral5082g00144 474 MobiDBLite consensus disorder prediction 41 71 - -
Pral5082g00144 474 CDD STKc_GSK3 140 432 IPR039192 -
Pral5082g00144 474 Gene3D Phosphorylase Kinase; domain 1 130 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5082g00144 Pral-Chr5082 791382 797471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5082g00144 149 455 MAP Kinase Gene Family AT3G59790 33.648 4.68e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pral5082g00144 Pkinase 1.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5082g00144 K27414 - qsa:O6P43_017567 739.184