Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5082g00122 | ATGAACAATAGAGCAAGATACCCACCTGGGATTGGCGTTGGCCGTGGAGGGGTGAACTCGAACGCTGCGTTTCAGCCCAGGCCGCCTCATCAACAACAGTACGTGCAGAGGCACTTAGCATCGCAACATCAACAGTACCGCCACCATCATCAACAACAGCAGTATCAGCAGCATCAACCGCAGCAGCAGAATCAACAGCATCATCACCAAGAACAACAGTGGCTGAGACGGACGCAGCCGGGTGCTGCTGATTCCAATGCGGTTGACGAGGTCGAGAAGACTGTCCAGTCTGAAGCCGTTGACCCTAGTTCACAAGATTGGAAGGCAAGGCTAAAGATACCACCACCTGATACCCGATACAAAACAGAGGATGTAACAGCGACTAAAGGAAATGAATTTGAGGATTACTTTTTGAAGCGTGAGTTGCTTATGGGAATATATGAGAAGGGTTTTGAAAGGCCTTCTCCTATTCAGGAAGAAAGTATACCAATTGCACTTACTGGTAGTGACATTCTTGCTAGGGCAAAGAATGGGACAGGAAAAACAGCTGCCTTTTGCATTCCTGCGTTGGAAAAAATTGACCAGGATAACAATGTTATTCAAGTTGTTATATTGGTCCCAACACGAGAGTTGGCCTTGCAAACATCTCAAGTGTGCAAAGAGCTTGGGAAACATTTGAAAATTCAAGTTATGGTTACAACAGGTGGTACCAGCCTAAAGGATGATATTATGCGGTTATATCAGCCAGTCCATTTACTAGTTGGAACACCAGGACGAATATTAGATCTTGTGAAGAAGGGTGTTTGTGTTTTGAAAGATTGCAATATGCTTGTTATGGATGAGGCTGATAAGCTCCTCTCCCCAGAGTTCCAGCCTTCAGTAGAGCAGTTGATTCATTTCCTGCCTACCAATCGTCAAATCTTGATGTTTTCAGCCACTTTTCCTGTCACCATTAAGGACTTTAAAGATAGATATCTTCAAAAGCCTTACGTTATTAACCTTATGGACGAGTTGACTTTGAAAGGGATCACACAATTTTATGCATTTGTGGAGGAGAGACAGAAACTCCACTGCTTGAACACTCTCTTCTCGAAGCTGCAAATAAACCAGTCAATTATTTTCTGCAATTCAGTGAACCGAGTTGAGCTCCTTGCCAAGAAAATTACAGAACTTGGGTATTCATGCTTCTATATTCATGCAAAGATGTTGCAGGATCATCGCAATAGAGTATTTCATGATTTCCGCAATGGTGCATGTAGGAATCTTGTTTGTACTGGTTGGTCGATCAGGGAGGTTTGGTCACCTTGGTTTAGCTGTGAACTTGATTACTTATGA | 1335 | 0.4352 | MNNRARYPPGIGVGRGGVNSNAAFQPRPPHQQQYVQRHLASQHQQYRHHHQQQQYQQHQPQQQNQQHHHQEQQWLRRTQPGAADSNAVDEVEKTVQSEAVDPSSQDWKARLKIPPPDTRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLVKKGVCVLKDCNMLVMDEADKLLSPEFQPSVEQLIHFLPTNRQILMFSATFPVTIKDFKDRYLQKPYVINLMDELTLKGITQFYAFVEERQKLHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTGWSIREVWSPWFSCELDYL | 444 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5082g00122 | 444 | Gene3D | - | 336 | 428 | IPR027417 | - | |
Pral5082g00122 | 444 | CDD | SF2_C_DEAD | 343 | 425 | - | - | |
Pral5082g00122 | 444 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 121 | 333 | IPR027417 | - | |
Pral5082g00122 | 444 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 338 | 426 | IPR027417 | - | |
Pral5082g00122 | 444 | SMART | ultradead3 | 150 | 346 | IPR014001 | - | |
Pral5082g00122 | 444 | CDD | DEADc_DDX6 | 133 | 333 | - | - | |
Pral5082g00122 | 444 | MobiDBLite | consensus disorder prediction | 1 | 122 | - | - | |
Pral5082g00122 | 444 | MobiDBLite | consensus disorder prediction | 24 | 80 | - | - | |
Pral5082g00122 | 444 | FunFam | ATP-dependent RNA helicase DDX6 | 112 | 335 | - | - | |
Pral5082g00122 | 444 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 342 | 444 | IPR001650 | - | |
Pral5082g00122 | 444 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 162 | 332 | IPR014001 | - | |
Pral5082g00122 | 444 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 278 | 286 | IPR000629 | - | |
Pral5082g00122 | 444 | Pfam | DEAD/DEAH box helicase | 156 | 320 | IPR011545 | GO:0003676|GO:0005524 | |
Pral5082g00122 | 444 | Pfam | Helicase conserved C-terminal domain | 356 | 425 | IPR001650 | - | |
Pral5082g00122 | 444 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 131 | 159 | IPR014014 | GO:0003724 | |
Pral5082g00122 | 444 | Gene3D | - | 89 | 335 | IPR027417 | - | |
Pral5082g00122 | 444 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | 61 | 427 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5082g00122 | Pral-Chr5082 | 693881 | 700429 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5082g00122 | 133 | 434 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 35.855 | 2.93e-66 | 216 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5082g00122 | K12614 | - | cpap:110819449 | 724.931 |