Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5082g00108 ATGGCAACTGATATGCAAAAGCTAATTGGAACAAGTGAAGATGACGAGGAAGAAATGGGAATGGATGTGAAAGAAGAGGATGATGAGGATGAAGAGAATGTAGGTAATCACGATGATGCTCCAGTGATGGTAGGCGCTGATGGTGGGATGGGAACTGTTAGTGGTAACAACAGTTTTCAACAGCGCCAGCAATTTCAAGAACAAGCAAGCACTCCAGGTGGTGGTACTCGGAGGTGTAGGCCTCTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGAGGCATCGTAGGGCTATAACTGCAAGGATTTTGGCAGGGCTTCGGAGGCATGGAAACTATAATCTTAGAGTTAGAGCTGACATAAATGATGTCATTGCTGCTCTGGCGAGGGAAGCTGGTTGGGTGGTTCTTCCAGATGGCACTACTTTTCCTTCAAGATCTCAGGGTCAGAGACCGGCTGGTGGTACTTCTACTGTGGTGACTTCATCAGCTTCCCATATGGCTTCCCAACAGACTACGCCTACTTCCCTCAAGGGAGCCACTTCAGGCTGCAGGAGCTCTTCAGAGTATAATGCCAGTCGATTGAAAGGTGTTTTTATGCCTGCTCCAACACCTTATGATCTAACCTCAGGTTCCCAGTCTCAATCATCATCCATGATGGGTAGTGGAGAAGAACAGAGAGACAACCATCCTCTCATTGGCTGTTCAATGGATAATGTTGATGAGAAGCAGATTGTGGACATGCCCCACAGATTATCTGAGCGTGATTTTGCTGGTACCCCATATGTTCCAGTTTATGTGATGCTACCGTTGGGTGTCATTAACATGAAGTGTGAACTTGTTGATCCGGATGGTCTATTAAAGCAGCTGAAGGTGTTGAAATCGTTGCATGTTGATGGTGTTATGGTAGACTGCTGGTGGGGAATAGTGGAGGCGCATGCTCCTCTGGAGTATAATTGGAATGGTTACAAGAAACTTTTTCAGATGGTGCGTGAACTTAAGCTTAAGCTGCAGGTTGTGATGTCTTTTCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGTATTCCAATACCCCATTGGGTTGCTGAAATTGGTAGGAGCAATCCTGACATTTTCTTCACTGATAGAGAGGGAAGGCACAATCACGAATGTCTTTCTTGGGGAATAGATAAGGAACGGGTTTTAAGAGGTCGAACTGCTTTAGAGGTTTATTTTGACTTCATGAGAAGCTTCAGGGTAGAGTTTGATGAGTACTTTGAGGATGGTATAATCTCCATGATTGAAGTTGGACTCGGTCCATGTGGGGAGCTAAGATACCCATCTTTCCCTGTGAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCAATATTTGTTAAAAAGTCTTAGGAAGGCAGCAGAAACAAGGGGACACCCCACGTGGGCTAGAGGACCAGATAATGCTGGTACCTATAATTCGCAACCACACGAAGCAGGTTTCTTTTGTGATGGAGGAGATTATGATGGTTACTATGGCAGGTTTTTTCTTAGCTGGTACTCTCAGGTTTTGGTTGACCATGGAAACTGTGTACTTTCTCTGGCAAAATTAGCTTTTGAGGGAACCTGCATTGCTGCAAAGCTATCAGGTATACACTGGTGGTACAAGACCGTGAGTCATGCTGCTGAATTAACTGCTGGGTTTTATAACTCGTGCAATCGTGATGGTTATGCTGCAATTATGGCGATGCTAAAGAAAAACGGGTCAAGTTTAAACTTAGCCTGCGCTGACCTGCACTCATTGAACCAGCATGAGGACCTTCCAGGGGCATTTTCAGATCCTGAGGGATTAGTCTGGCAGGTGTTGAATGCAGCTTGGGATGTTTGCCTCCCAGTTTCAAGTGAGAATGCACTTCCTTGCCTAAATAGAACTGGCTATAATAAGATTTTGGATAATGCCAAGCCCATGAATGATCCAGATGGAAAACATTTCACATCGTTTACTTACCTGAGACTAAGTCCACTTCTTATGGAAAGACAAAACTTCTTAGAGTTTGAACGATTTGTGAAGAGAATGCATGGGGAAGCCGTTCTCGATCTCCAGGCATAG 2100 0.4462 MATDMQKLIGTSEDDEEEMGMDVKEEDDEDEENVGNHDDAPVMVGADGGMGTVSGNNSFQQRQQFQEQASTPGGGTRRCRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGQRPAGGTSTVVTSSASHMASQQTTPTSLKGATSGCRSSSEYNASRLKGVFMPAPTPYDLTSGSQSQSSSMMGSGEEQRDNHPLIGCSMDNVDEKQIVDMPHRLSERDFAGTPYVPVYVMLPLGVINMKCELVDPDGLLKQLKVLKSLHVDGVMVDCWWGIVEAHAPLEYNWNGYKKLFQMVRELKLKLQVVMSFHECGGNFGDDVCIPIPHWVAEIGRSNPDIFFTDREGRHNHECLSWGIDKERVLRGRTALEVYFDFMRSFRVEFDEYFEDGIISMIEVGLGPCGELRYPSFPVKHGWRYPGIGEFQCYDQYLLKSLRKAAETRGHPTWARGPDNAGTYNSQPHEAGFFCDGGDYDGYYGRFFLSWYSQVLVDHGNCVLSLAKLAFEGTCIAAKLSGIHWWYKTVSHAAELTAGFYNSCNRDGYAAIMAMLKKNGSSLNLACADLHSLNQHEDLPGAFSDPEGLVWQVLNAAWDVCLPVSSENALPCLNRTGYNKILDNAKPMNDPDGKHFTSFTYLRLSPLLMERQNFLEFERFVKRMHGEAVLDLQA 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5082g00108 699 MobiDBLite consensus disorder prediction 15 35 - -
Pral5082g00108 699 MobiDBLite consensus disorder prediction 205 223 - -
Pral5082g00108 699 MobiDBLite consensus disorder prediction 1 52 - -
Pral5082g00108 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 317 335 IPR001554 GO:0000272|GO:0016161
Pral5082g00108 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 296 310 IPR001554 GO:0000272|GO:0016161
Pral5082g00108 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 574 597 IPR001554 GO:0000272|GO:0016161
Pral5082g00108 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 339 360 IPR001554 GO:0000272|GO:0016161
Pral5082g00108 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 432 454 IPR001554 GO:0000272|GO:0016161
Pral5082g00108 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 539 555 IPR001554 GO:0000272|GO:0016161
Pral5082g00108 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 556 567 IPR001554 GO:0000272|GO:0016161
Pral5082g00108 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 505 524 IPR001554 GO:0000272|GO:0016161
Pral5082g00108 699 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 614 636 IPR001554 GO:0000272|GO:0016161
Pral5082g00108 699 PRINTS Plant beta-amylase signature 422 431 IPR001371 GO:0000272|GO:0016161
Pral5082g00108 699 PRINTS Plant beta-amylase signature 665 679 IPR001371 GO:0000272|GO:0016161
Pral5082g00108 699 PRINTS Plant beta-amylase signature 680 694 IPR001371 GO:0000272|GO:0016161
Pral5082g00108 699 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 211 692 IPR001554 GO:0000272|GO:0016161
Pral5082g00108 699 MobiDBLite consensus disorder prediction 202 227 - -
Pral5082g00108 699 MobiDBLite consensus disorder prediction 141 185 - -
Pral5082g00108 699 SUPERFAMILY (Trans)glycosidases 256 694 IPR017853 -
Pral5082g00108 699 FunFam Beta-amylase 253 699 - -
Pral5082g00108 699 Pfam BES1/BZR1 plant transcription factor, N-terminal 75 210 IPR008540 -
Pral5082g00108 699 Pfam Glycosyl hydrolase family 14 265 684 IPR001554 GO:0000272|GO:0016161
Pral5082g00108 699 Gene3D Glycosidases 253 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5082g00108 Pral-Chr5082 607874 614817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5082g00108 1 696 Glycoside Hydrolase AT2G45880 66.810 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pral5082g00108 Glyco_hydro_14 1.1e-103 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5082g00108 K01177 - gmx:100805560 1131.7