Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5082g00106 ATGAAATCCGTCATTCTCATACTCTCAGTTCTTGTGTTCTTGGCTCCACACTGGGTTGATGCCAGAACGCACGTGAAGATCACAAACTATTTATATGGCAACTTGGAGCTGAGAGTTCATTGCCGATCCAAAGATAATGATCTGGGGAATCACCTTCTTCGTGCCGAGCAAAGTTTTGACTTCAGTTTCAGCCCTAATATCTGGGGCACAACTCTGTTCTATTGTAGCTTTAAATGGGACGGTTCTTATAAGTGGTTTGTTATATACGACGATGGAAGGGATGAATATAACTGCAATGACGCTACCTGCATTTGGCAGATCACGCAGGACCGGCCATGTCAGGTTAATGCACCTGGCAACGGTCTGCTTTGCTATCCCTGGGATGGCGAATAA 393 0.4529 MKSVILILSVLVFLAPHWVDARTHVKITNYLYGNLELRVHCRSKDNDLGNHLLRAEQSFDFSFSPNIWGTTLFYCSFKWDGSYKWFVIYDDGRDEYNCNDATCIWQITQDRPCQVNAPGNGLLCYPWDGE 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5082g00106 130 PANTHER - 21 116 IPR010264 -
Pral5082g00106 130 Pfam Plant self-incompatibility protein S1 24 127 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5082g00106 Pral-Chr5082 604443 604835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5082g00106 20 130 Carbohydrate Esterase AT3G16970 40.517 2.31e-25 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5082g00106 - - pcin:129289386 220.32