Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5082g00085 ATGGATAAGGAGCAGACCCCCAAAATTACCAGAAGAACAACTAGATCTTTGGCTTCGGCAACCACTTTGGATAACCCCGTGACTGAAGTAACTAATTTTGGTCCTCCTTCAGCAGCAAATCATCCCATGGTTGAAGGAGATCCAGAAGTGGACAAGGAGGGAACCCCACAAATTCCCAGAAGGACAACCAGATCTTTTGCTTCAGCATTCAATTCAGATAATATAGCAACAAAAGTAACTAGCATTGACCCTCCTACAATAAATGACCTTTTAGTTGGAGGAGATCCTATTAGTCTGGATGATTTAATATCTGCTTTTCCTGGTAGACGTAGCCAGATTGTTGAGCTTATGCGTCTTTTGGGACCTTTGAATTCACCAACATTGCCTTTATTTGTGTATGGTGGTCCTTCTACAGGAAAAACTAGCATCATTCTTCAATTGTTTAGGCATCTCAACAGGCCTCTTGTTTATTCAAGCTGTAGTACATGCTATAACCAGCGGATCTTGTTTGAATCTATTTTGAATTCATTGTTTCTTCATAGAAAAAGTGCTGCCAATGGTTACTCAAATGCAAAACGATGTGATAGACCATCTGACTTCGTCAATTTTCTTAGGGATGCATTGGCCAATGTGATAAATAATCTGAAGTCAAATTCAGAGAAATTGACATCAAATAAGATGGCAGCAAGGGGAACTGGAAATATGATTTACTTGGTATTTGACAATTTTCATCTTGTTAGGGAGTGGGATAAAAGTTCTACTATAGTACCCTTTCTGTTTAATCTCTATGATCTGCTAAATATGCCAGAGGTGGGCTTGATATTTATTAGCAGTACTTCCCCGGATACCTATTATGCTAATATGGGTTATGTGGAACCTGTCCCCGTCTTCTTTCCTGATTATACGGAGGTTGATCTTCATCAAATATTCTTGAGAAACCAAGCAAACCAAAAGTTGTATTCTTCATTTCTGGATGTAGTTTTGAGGCCTTTCTGTAGAGTTACAAGACAGGTGGATGAATTGTTTACCGCCTTCAAGTCACTATTTGAAAAATACTGTGAACCTTTAAGTGATCATAGTGTTGCTCCTAGTGAAGACATGAAGAGAAGGTTATTTAGCCATCTGAAGCCTCATATTGGTTCCTATTTGAATGAAATATTTAAGATTTCATCTCTTCCTTCACTTGAAGTTGAGATCCATAAAGAGACCAAAAGGAAGGGGAATCCCAAGAAATTGGAGAGATCTGAAGAAATTGAGGAGCTGGAATTTCACATGTCTACTTGTGCTAAATATCTCCTTATTTCTGCATTTCTTGCATCCCGAAACCCTGTGACCCTTGACGACTCACTTTTTGATCCGACTGGTGGTTTAAACAATCGAAAACGTAAGAGGAAGACCTCTGCAAAAGCGCAGGAACAGAAACAAAGTGCAGAAGAGGAACTAGTGACGAAAGGACCTGGAACTTTTCCACTAGAGAGGTTATTAGCAATCTTCCAGTGTATAGTGTCGGTTGCAGAAGATCCATCTGATGAAGAGGAACAAAGGAATGGTGGATTAGGAATCGAAGGTGGTAAGGGTGGGCTAATGTCCGACGTTCTTTTACAGCTATCCAGTCTCTGCAATGCTAATTTTATTATCAAAGGAGGAAGCTGTCCTATAGAAGGCTCGACTCGGTATCGATCTGCTATATCTGAAGGCCTGGCTTTGAAGGTTGCAAGGAGCCTCAAATTCCCACTGTCAAAATATTTGTATAGAAGATAG 1761 0.3986 MDKEQTPKITRRTTRSLASATTLDNPVTEVTNFGPPSAANHPMVEGDPEVDKEGTPQIPRRTTRSFASAFNSDNIATKVTSIDPPTINDLLVGGDPISLDDLISAFPGRRSQIVELMRLLGPLNSPTLPLFVYGGPSTGKTSIILQLFRHLNRPLVYSSCSTCYNQRILFESILNSLFLHRKSAANGYSNAKRCDRPSDFVNFLRDALANVINNLKSNSEKLTSNKMAARGTGNMIYLVFDNFHLVREWDKSSTIVPFLFNLYDLLNMPEVGLIFISSTSPDTYYANMGYVEPVPVFFPDYTEVDLHQIFLRNQANQKLYSSFLDVVLRPFCRVTRQVDELFTAFKSLFEKYCEPLSDHSVAPSEDMKRRLFSHLKPHIGSYLNEIFKISSLPSLEVEIHKETKRKGNPKKLERSEEIEELEFHMSTCAKYLLISAFLASRNPVTLDDSLFDPTGGLNNRKRKRKTSAKAQEQKQSAEEELVTKGPGTFPLERLLAIFQCIVSVAEDPSDEEEQRNGGLGIEGGKGGLMSDVLLQLSSLCNANFIIKGGSCPIEGSTRYRSAISEGLALKVARSLKFPLSKYLYRR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5082g00085 586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 369 IPR027417 -
Pral5082g00085 586 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 98 585 IPR020796 GO:0000808|GO:0005634|GO:0006260
Pral5082g00085 586 Coils Coil 460 480 - -
Pral5082g00085 586 Gene3D - 106 284 IPR027417 -
Pral5082g00085 586 Pfam AAA ATPase domain 106 257 IPR041664 -
Pral5082g00085 586 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 296 583 IPR047088 -
Pral5082g00085 586 MobiDBLite consensus disorder prediction 449 483 - -
Pral5082g00085 586 MobiDBLite consensus disorder prediction 1 57 - -
Pral5082g00085 586 MobiDBLite consensus disorder prediction 11 35 - -
Pral5082g00085 586 FunFam Origin of replication complex subunit 5 106 287 - -
Pral5082g00085 586 Coils Coil 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5082g00085 Pral-Chr5082 493322 496965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5082g00085 52 586 Core DNA Replication Machinery Family AT4G29910 59.851 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5082g00085 K02607 - qsa:O6P43_017636 805.438