Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5082g00083 ATGATGCGAAGTAAAACATCATCAGTAGCTGATTACATGGATAAGGAGCAGACCCCCAAAATTACCAGAAGAACAACTAGATCTTTGGCTTCGGCAACCACTTTGGATAACCCCGTGACTGAAGTAACTAATTTTGGTCCTCCTTCAGCAGCAAATCATCCCATGGTTGAAGGAGATCCAGAAGTGGACAAGGAGGGAACCCCACAAATTCCCAGAAGGACAACCAGATCTTTTGCTTCAGCATTCAATTCAGATAATATAGCAACAAAAGTAACTAGCATTGACCCTCCTACAATAAATGACCTTTTAGTTGGAGGAGATCCTATTAGTCTGGATGATTTAATATCTGCTTTTCCTGGTAGACGTAGCCAGATTGTTGAGCTTATGCGTCTTTTGGGACCTTTGAATTCACCAACATTGCCTTTATTTGTGTATGGTGGTCCTTCTACAGGAAAAACTAGCATCATTCTTCAATTGTTTAGGCATCTCAACAGGCCTCTTGTTTATTCAAGCTGTAGTACATGCTATAACCAGCGGATCTTGTTTGAATCTATTTTGAATTCATTGTTTCTTCATAGAAAAAGTGCTGCCAATGGTTACTCAAATGCAAAACGATGTGATAGACCATCTGACTTCGTCAATTTTCTTAGGGATGCATTGGCCAATGTGATAAATAATCTGAAGTCAAATTCAGAGAAATTGACATCAAATAAGATGGCAGCAAGGGGAACTGGAAATATGATTTACTTGGTATTTGACAATTTTCATCTTGTTAGGGAGTGGGATAAAAGTTCTACTATAGTACCCTTTCTGTTTAATCTCTATGATCTGCTAAATATGCCAGAGGTGGGCTTGATATTTATTAGCAGTACTTCCCCGGATACCTATTATGCTAATATGGGTTATGTGGAACCTGTCCCCGTCTTCTTTCCTGATTATACGGAGGTTGATCTTCATCAAATATTCTTGAGAAACCAAGCAAACCAAAAGTTGTATTCTTCATTTCTGGATGTAGTTTTGAGGCCTTTCTGTAGAGTTACAAGACAGGTGGATGAATTGTTTACCGCCTTCAAGTCACTATTTGAAAAATACTGTGAACCTTTAAGTGATCATAGTGTTGCTCCTAGTGAAGACATGAAGAGAAGGTTATTTAGCCATCTGAAGCCTCATATTGGTTCCTATTTGAATGAAATATTTAAGATTTCATCTCTTCCTTCACTTGAAGTTGAGATCCATAAAGAGACCAAAAGGAAGGGGAATCCCAAGAAATTGGAGAGATCTGAAGAAATTGAGGAGCTGGAATTTCACATGTCTACTTGTGCTAAATATCTCCTTATTTCTGCATTTCTTGCATCCCGAAACCCTGTGACCCTTGACGACTCACTTTTTGATCCGACTGGTGGTTTAAACAATCGAAAACGTAAGAGGAAGACCTCTGCAAAAGCGCAGGAACAGAAACAAAGTGCAGAAGAGGAACTAGTGACGAAAGGACCTGGAACTTTTCCACTAGAGAGGTTATTAGCAATCTTCCAGTGTATAGTGTCGGTTGCAGAAGATCCATCTGATGAAGAGGAACAAAGGAATGGTGGATTAGGAATCGAAGGTGGTAAGGGTGGGCTAATGTCCGACGTTCTTTTACAGCTATCCAGTCTCTGCAATGCTAATTTTATTATCAAAGGAGGAAGCTGTCCTATAGAAGGCTCGACTCGGTATCGATCTGCTATATCTGAAGGCCTGGCTTTGAAGGTTGCAAGGAGCCTCAAATTCCCACTGTCAAAATATTTGTATAGAAGATAG 1797 0.3979 MMRSKTSSVADYMDKEQTPKITRRTTRSLASATTLDNPVTEVTNFGPPSAANHPMVEGDPEVDKEGTPQIPRRTTRSFASAFNSDNIATKVTSIDPPTINDLLVGGDPISLDDLISAFPGRRSQIVELMRLLGPLNSPTLPLFVYGGPSTGKTSIILQLFRHLNRPLVYSSCSTCYNQRILFESILNSLFLHRKSAANGYSNAKRCDRPSDFVNFLRDALANVINNLKSNSEKLTSNKMAARGTGNMIYLVFDNFHLVREWDKSSTIVPFLFNLYDLLNMPEVGLIFISSTSPDTYYANMGYVEPVPVFFPDYTEVDLHQIFLRNQANQKLYSSFLDVVLRPFCRVTRQVDELFTAFKSLFEKYCEPLSDHSVAPSEDMKRRLFSHLKPHIGSYLNEIFKISSLPSLEVEIHKETKRKGNPKKLERSEEIEELEFHMSTCAKYLLISAFLASRNPVTLDDSLFDPTGGLNNRKRKRKTSAKAQEQKQSAEEELVTKGPGTFPLERLLAIFQCIVSVAEDPSDEEEQRNGGLGIEGGKGGLMSDVLLQLSSLCNANFIIKGGSCPIEGSTRYRSAISEGLALKVARSLKFPLSKYLYRR 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5082g00083 598 MobiDBLite consensus disorder prediction 1 69 - -
Pral5082g00083 598 Gene3D - 118 296 IPR027417 -
Pral5082g00083 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 381 IPR027417 -
Pral5082g00083 598 FunFam Origin of replication complex subunit 5 118 299 - -
Pral5082g00083 598 Coils Coil 472 492 - -
Pral5082g00083 598 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 110 597 IPR020796 GO:0000808|GO:0005634|GO:0006260
Pral5082g00083 598 MobiDBLite consensus disorder prediction 461 495 - -
Pral5082g00083 598 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 308 595 IPR047088 -
Pral5082g00083 598 MobiDBLite consensus disorder prediction 23 47 - -
Pral5082g00083 598 Pfam AAA ATPase domain 118 269 IPR041664 -
Pral5082g00083 598 Coils Coil 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5082g00083 Pral-Chr5082 493197 496965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5082g00083 64 598 Core DNA Replication Machinery Family AT4G29910 59.851 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5082g00083 K02607 - qsa:O6P43_017636 805.438