Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5082g00078 ATGGCAAGGTGGTCAATACCTGATGACAGAATTATTACAGATTTCGGTGACAACCCTAAGAAGTTTGAACATGCTGGAGTTTATATAGATGTCAACCTATTTTCAAAAGCTCATGGGGCCAAATCTGAGAGAGAACAAGATTATAGAGGCGTTAAAGTTAAATATGATGGGGTCAAATTTTCATTTGATCAATTTCTCATTGACTTCTTGAAAGAGATCCATGCCCATAATTCTTTTCGACCTATTCCACCAATGCTTGGTAATGGGCAACTGGTGGATTTGAAAACCTTATTCTTAATTGTGATAGGGAAAGGGGGGTATGATGCAGTCTCTAAAAACAATTTATGGAATTTGGTGGCCGAAAAATCTGGGTTAGGTGCAAATATTGGTTCATCGGCAAAGTTGATCTATTGTAAGTATTTAGACATTTTAGAGATATGGCTCATAAAAGTTTCCAAGGGTAGGGTACTTGGTTACAGTTTGATTGATGATAGAATCAACTTTGATAGGCAACTGGTGAAGCTTCAAGATAAAATAAGAAGGCTATTGTCGGATTATATCTCTCAAGATAGAGGAGATAAGATATCTCCTATTCATGATTTCAAGAGTAAGTATGATTTTCTGAATGGAAGTAAATTGTTTGATACTGATAGAGTAAAGAGTAATGCCCAGGATGGTGGATTTCTTGGTTTGGACATGCCAAGAAACTTGTGCAATATTGATGACGCAATAACATTGAAAGAGTCTAGTGGTAGGAAGATCATTGCAGAGAAACCAGTAAATGCAATAGATGCAGGGGATTCATCTCATAATAATGAAGCGAACAATAATGTGCATAGTTTGCCTAATGGAGACAAGGGATTTGACAATGACGATGATGTCTTGATATTAGATCCATCTAGTGTTAATAAGGAGAACTTTGGGCGTAAGAGGAAAAGAAAGTCTATGCAAGAAATGCTATGTTGGGTAACTAGCATTGCAAAGAATCCATGTGATCCTATAGTTTTTTCAACATTTGAAAGATCAAAGTGGAGTTCTCAAAGTGAGGAGGAGATCAAGAAGCAAGTTTTGTTGTTTCGAGAGGCTGTCTTCATGAAAAGAAATTTTGAGTCAAGCAAAGAACAGGATGATTGCCAGGGCATGAGGATGCATCCTTCCATGCATGATGATCACCCAGGGACAACTTGCAATCCTAGGGAAAAGTTGAAGTGCAGTAATAACAGGCTTCCACGTAAAAATGCCGCACCTGTTGTACCAGTCTCATCAAAAATTCCGATTGGAACTGAAGATGATTCGAAGAATACTCAAAGTCCACTCATTGAAGATCGTGGTGAGAAAAAAGCCCTTGCTAAATGTAGCACACTAACCATCCCTGTAGGGCCAACTCATCAGGCTTCGGTACCAGACTGGACTGGTATGACTTCTAAAAGTGATCCTAAATGGCTGGGGACCCGAATATGGCCATTAAAAGGTGTAAATCGTCATAGACTTCTCGATCAAAGGGATCCTATTGGTAAGGGAAGAAATGACTTTTGCAAGTGCCAAGTACCAGGATCAGTGGAGTGTGTCAAATTACACATTGTTGAAAATAGAGAGAAAGTCAAATTGGAATTGGATGTGGCCTTTTACCAGTGGAACTTTGATAAAGTAGGAGAGGAGGTCAGCCGTTACTGGACATATGAAGAAGAGAAAAAATTCAAGGACGGGTTGAAATCAAACCTCCCATCACGCAAGAAGTCTCTTTGGGATCGTATGTTCAAATCTTTTCCTAAGAAAAGCCGAGAAGATTTAGTCAACTACTATTTCAATGTTTTTGTTCTGCGATGTCGGAGATTCCAGAATCGGCATTCTCCAAATAACATTGATAGTGATGATGATGAATCAGCGTCGGAACCACTAATCAAATCCAAAGCAACTCACTCACTTGCTCGGAAGAAAATAGTAAGTCTCATCAATCCAATTCAGTTCTCTAGAAAATACTTTGGGAGATAG 1992 0.3886 MARWSIPDDRIITDFGDNPKKFEHAGVYIDVNLFSKAHGAKSEREQDYRGVKVKYDGVKFSFDQFLIDFLKEIHAHNSFRPIPPMLGNGQLVDLKTLFLIVIGKGGYDAVSKNNLWNLVAEKSGLGANIGSSAKLIYCKYLDILEIWLIKVSKGRVLGYSLIDDRINFDRQLVKLQDKIRRLLSDYISQDRGDKISPIHDFKSKYDFLNGSKLFDTDRVKSNAQDGGFLGLDMPRNLCNIDDAITLKESSGRKIIAEKPVNAIDAGDSSHNNEANNNVHSLPNGDKGFDNDDDVLILDPSSVNKENFGRKRKRKSMQEMLCWVTSIAKNPCDPIVFSTFERSKWSSQSEEEIKKQVLLFREAVFMKRNFESSKEQDDCQGMRMHPSMHDDHPGTTCNPREKLKCSNNRLPRKNAAPVVPVSSKIPIGTEDDSKNTQSPLIEDRGEKKALAKCSTLTIPVGPTHQASVPDWTGMTSKSDPKWLGTRIWPLKGVNRHRLLDQRDPIGKGRNDFCKCQVPGSVECVKLHIVENREKVKLELDVAFYQWNFDKVGEEVSRYWTYEEEKKFKDGLKSNLPSRKKSLWDRMFKSFPKKSREDLVNYYFNVFVLRCRRFQNRHSPNNIDSDDDESASEPLIKSKATHSLARKKIVSLINPIQFSRKYFGR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5082g00078 663 MobiDBLite consensus disorder prediction 264 285 - -
Pral5082g00078 663 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 56 633 - -
Pral5082g00078 663 SUPERFAMILY ARID-like 62 154 IPR036431 GO:0003677
Pral5082g00078 663 MobiDBLite consensus disorder prediction 265 283 - -
Pral5082g00078 663 SMART bright_3 57 150 IPR001606 GO:0003677
Pral5082g00078 663 CDD SANT 558 605 IPR001005 -
Pral5082g00078 663 SMART ELM2_2 457 509 IPR000949 -
Pral5082g00078 663 CDD ARID 62 141 - -
Pral5082g00078 663 SMART ARID_2 53 145 - -
Pral5082g00078 663 Gene3D - 41 155 IPR036431 GO:0003677
Pral5082g00078 663 Pfam ARID/BRIGHT DNA binding domain 69 142 IPR001606 GO:0003677
Pral5082g00078 663 ProSiteProfiles ARID domain profile. 56 149 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5082g00078 Pral-Chr5082 465091 468560 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pral5082g00078 ARID 3.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5082g00078 - - pcin:129289383 852.818