Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5082g00076 ATGGGAGGTTGCTGCTGTTCTGCCAGAAAACCTCATCTACATGGTGCACCAGTGTATTATTATTGCCCAGCATCCTTGGAAGAGCGCGAGTCATTAACATCAAATGATGGTACGGCTGCTTCACATGGTGCTAGATTGCTAGCAGGTTTGAACTTGGAAACGGCCACACCGGATACGTTCCGGCCCCCTCCTGCACCTTTGCCATATGATGCAGTCTTTGGTCCAATATCAACAGATTCTGAATCTGGAAGAAAAACAGTTAGTGGTAGTAGTTTTGAAACATTAATTACATGTGAAGATCTTGAAGAATCGGATTGCAAAACTCAAGCAAATTCTGAACTTTTGTCTCCAAAGAAGATAGAATTATCGAAATCAAATGAATGTCATGTATTAATGGCAGAAGAAGAAGAAGTCTGTCCAATTTGCCTTGAAGAATATGAGGTTGAGAATCCTAAAACTCTGACGAAGTGTGAACACCATTTTCACCTATCTTGCATTCTTGAGTGGATGGAAAGAAGTGACGCCTGTCCTATATGTGATCAGGAGATGATATTTGAGTAG 561 0.4135 MGGCCCSARKPHLHGAPVYYYCPASLEERESLTSNDGTAASHGARLLAGLNLETATPDTFRPPPAPLPYDAVFGPISTDSESGRKTVSGSSFETLITCEDLEESDCKTQANSELLSPKKIELSKSNECHVLMAEEEEVCPICLEEYEVENPKTLTKCEHHFHLSCILEWMERSDACPICDQEMIFE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5082g00076 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 186 IPR013083 -
Pral5082g00076 186 SUPERFAMILY RING/U-box 132 184 - -
Pral5082g00076 186 SMART ring_2 139 179 IPR001841 -
Pral5082g00076 186 Pfam Ring finger domain 139 179 IPR001841 -
Pral5082g00076 186 ProSiteProfiles Zinc finger RING-type profile. 139 180 IPR001841 -
Pral5082g00076 186 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 36 185 - -
Pral5082g00076 186 FunFam Putative E3 ubiquitin-protein ligase RHB1A 115 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5082g00076 Pral-Chr5082 452699 456898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5082g00076 1 186 C3H Transcription Factor Family AT4G00335 58.824 2.84e-74 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5082g00076 - - gmx:100792561 310.842