Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5082g00075 ATGGGAGGTTGCTGCTGTTCTGCCAGAAAACCTCATCTACATGGTGCACCAGTGTATTATTATTGCCCAGCATCCTTGGAAGAGCGCGAGTCATTAACATCAAATGATGGTACGGCTGCTTCACATGGTGCTAGATTGCTAGCAGGTTTGAACTTGGAAACGGCCACACCGGATACGTTCCGGCCCCCTCCTGCACCTTTGCCATATGATGCAGTCTTTGGTCCAATATCAACAGATTCTGAATCTGGAAGAAAAACAGTTAGTGGTAGTAGTTTTGAAACATTAATTACATGTGAAGATCTTGAAGAATCGGATTGCAAAACTCAAGCAAATTCTGAACTTTTGTCTCCAAAGAAGATAGAATTATCGAAATCAAATGAATGTCATGTATTAATGGCAGAAGAAGAAGAAGTCTGTCCAATTTGCCTTGAAGAATATGAGGTTGAGAATCCTAAAACTCTGACGAAGTGTGAACACCATTTTCACCTATCTTGCATTCTTGAGTGGATGGAAAGAAGTGACGCCTGTCCTATATGTGATCAGGTTTGCTTTTTGCAGTTATTCCTTATTTATTTGTTTGTACATGACAGACAGAGTAGAGCTTTGTTTTTGAGCCTAAAACTTCCTGCAAACTACTCAAACCCCTCTCATCATTGGATCACACATGATGAATGGACTGGAAGTTGCTGA 690 0.4087 MGGCCCSARKPHLHGAPVYYYCPASLEERESLTSNDGTAASHGARLLAGLNLETATPDTFRPPPAPLPYDAVFGPISTDSESGRKTVSGSSFETLITCEDLEESDCKTQANSELLSPKKIELSKSNECHVLMAEEEEVCPICLEEYEVENPKTLTKCEHHFHLSCILEWMERSDACPICDQVCFLQLFLIYLFVHDRQSRALFLSLKLPANYSNPSHHWITHDEWTGSC 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5082g00075 229 SMART ring_2 139 179 IPR001841 -
Pral5082g00075 229 SUPERFAMILY RING/U-box 132 186 - -
Pral5082g00075 229 ProSiteProfiles Zinc finger RING-type profile. 139 180 IPR001841 -
Pral5082g00075 229 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 36 185 - -
Pral5082g00075 229 Pfam Ring finger domain 139 179 IPR001841 -
Pral5082g00075 229 FunFam Putative E3 ubiquitin-protein ligase RHB1A 115 184 - -
Pral5082g00075 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 187 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5082g00075 Pral-Chr5082 452569 455814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5082g00075 1 181 C3H Transcription Factor Family AT4G00335 59.341 9.25e-71 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5082g00075 - - gmx:100792561 302.367