Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5082g00054 ATGGTGTCGGTAAATCCGAATCCTGCTCAAGGCTTCTACTTCTTCGATCCCTCCAGGATGGGGCTTCCCGGTGTCAATCCTACGCCGCCACTTCCCCCTACTGCTACGGCTTCTTCGTCCACGGCCATCCCCGCCGGCGTCAGCACGGCTTCGTACGGGGACGATCTGAGTAAGAAGATCAGAAAACCATACACGATTACCAAGTCCAGGGAGAGCTGGACGGAGCAGGAGCACGACAAGTTTCTCGAAGCTCTCCAATTATTTGACCGTGACTGGAAGAAGATTGAAGCATTTGTTGGTTCAAAAACTGTTATCCAGATACGAAGTCATGCACAGAAGTATTTCCTGAAAGTTCAGAAGAATGGAACAAGTGAACATGTGCCTCCCCCTCGGCCAAAAAGAAAGGCTGCTCATCCATACCCACAAAAGGCACCTAAAAATGCAGCTCCAGCAGTATCCCAAGTTACAGTGCCATTGCAATCATCATCTTCTTTCATTGAGCCCTCGTACATTTATAGGCCAGACTCTTCATCTGCGCTTGGAACTCCAGTTACCCGTGTGCCTTTGTCAAACTGGCCTTGTAATGTTAGCCCACAGCCCAGTGTGCCACAAGTGACTAAAGATGAGATGGGGTTGCATGGGCAAGCTGCTTCTCTAAATTGTTGCTATAGCAGTAGTAATGAGAGCACTCCAAGGGCTTGTCCAGGTAGCAAAGTTATTGATCAAGGAAACTCAGGCAAGCTGATCAAAGATGCAGTAATGCCAGATTTTGCACAAGTTTACAGCTTTATTGGTAGTGTGTTTGATCCAAATGCTGCAAATCACTTGGAGAGACTGAAACAGATGGACCCGATAAATGTGGAAGCTGTATTATTATTGATGAGAAACCTCACCATCAATTTAATGAGTCCCAAATTTGAAGATCATAGAAGGTTGCTTTCATCCTATGATCCTGACCATTAG 963 0.4652 MVSVNPNPAQGFYFFDPSRMGLPGVNPTPPLPPTATASSSTAIPAGVSTASYGDDLSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAAPAVSQVTVPLQSSSSFIEPSYIYRPDSSSALGTPVTRVPLSNWPCNVSPQPSVPQVTKDEMGLHGQAASLNCCYSSSNESTPRACPGSKVIDQGNSGKLIKDAVMPDFAQVYSFIGSVFDPNAANHLERLKQMDPINVEAVLLLMRNLTINLMSPKFEDHRRLLSSYDPDH 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5082g00054 320 FunFam protein REVEILLE 6 isoform X1 72 120 - -
Pral5082g00054 320 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Pral5082g00054 320 Gene3D - 73 120 - -
Pral5082g00054 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Pral5082g00054 320 SMART sant 69 117 IPR001005 -
Pral5082g00054 320 NCBIfam myb-like DNA-binding domain, SHAQKYF class 68 117 IPR006447 GO:0003677
Pral5082g00054 320 SUPERFAMILY Homeodomain-like 64 120 IPR009057 -
Pral5082g00054 320 CDD SANT 72 115 IPR001005 -
Pral5082g00054 320 ProSiteProfiles SANT domain profile. 68 121 IPR017884 -
Pral5082g00054 320 PANTHER SWI/SNF COMPLEX-RELATED 35 302 - -
Pral5082g00054 320 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Pral5082g00054 320 MobiDBLite consensus disorder prediction 119 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5082g00054 Pral-Chr5082 371290 376360 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5082g00054 Myb_DNA-binding 2.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5082g00054 - - gmx:778090 446.047