Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5082g00027 ATGGGAAACAGTGAGGAAGGGAAATCAACTAAAACTGAAAAACCTTCTTCACCTGTAGCAGTGGACCAGGCTAATCAGGGCAGCCAGCCCAACATTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCTCCATGCCGCCATACTACAACCCAGCTGTGAGTTCTGGCCACCCTCACCCCTACATGTGGCCACCACAGCCCATGATGCCACCGCCATATGGGACTCCTTACGCAGCAATTTATTCACATGGAGGTGTTTATCCTCACCCCTCAATTCCTATAGGACCACAATCACATGGTCAAGGAGTTCCAACGTCACCTGCAGCTGCAACTCCTTTGAACATGGAGACACCAACCAAATCTTCTGGAAACGCCGATCAGGGCCTGATGAAGAAGTTGAAGGGGTTCGATGGGCTTGCAATGTCTATTGGAAATGGCAATGCTGAGAGTGCTGACCGTGGAGCGGAAAACAGGCTGTCACAGAGTTTGGATACTGAGAGTTACAGTGACGGAAGTGACAGCAACACTGCAGGGGCTAATCAAGCAAGCAGGAAAAGAAGCCGTGAGGGAACACCAGCTACTGATGGAGACGGCAAAAGTGGGAAACAAGCAAATCCAGTTTCCAAAGGAGCTGGAGCCTCCAATAAGATGACATCAATTACCCCGGCCAATGTTGGAGGAGCAGTAGTTGGACCTGTAGTTTCTTCTGGTATGACAACAGCGTTGGAGCTGAGGAACCCATCCGTTCTTTCTAAGTCAAATTCCCCAAGTAATCCACAGCCTTGCGCGGTAGTGCCTCCTGAGGCTTGGATACAGAATGAACGGGAGCTGAAGCGGGAGAGGAGAAAGCAATCAAATCGGGAATCTGCTAGACGGTCCCGATTGAGAAAGCAGGCTGAGACAGAAGAACTTGCACGAAAAGTTGAATCCTTGACGTCTGAGAATATTACACTGAAATCAGAAATAAATCGATTGACTGAAAGTTCAGGGAAGCTTAAGATGGAAAATGAGGCGTTAATGGAAAAACTGAAAAATGCACGAGGAGAAAAGGATGAAATCTTTTTGACACCGAGTACGGAGAATTTGCTATCCAGGGTGAACAATTCCAGTTCTTGTGACAATAGAACTATAGAGGGTGAGAACGCTTTGTGTGAGAAGAAGCCAAACTCGGGAGCAAAGCTGCATCAACTATTGGACACAAGTCCGAGGACTGATGCTGTGGCAGCTGGCTGA 1251 0.4828 MGNSEEGKSTKTEKPSSPVAVDQANQGSQPNIHVYPDWAAMQAYYGPRVSMPPYYNPAVSSGHPHPYMWPPQPMMPPPYGTPYAAIYSHGGVYPHPSIPIGPQSHGQGVPTSPAAATPLNMETPTKSSGNADQGLMKKLKGFDGLAMSIGNGNAESADRGAENRLSQSLDTESYSDGSDSNTAGANQASRKRSREGTPATDGDGKSGKQANPVSKGAGASNKMTSITPANVGGAVVGPVVSSGMTTALELRNPSVLSKSNSPSNPQPCAVVPPEAWIQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENITLKSEINRLTESSGKLKMENEALMEKLKNARGEKDEIFLTPSTENLLSRVNNSSSCDNRTIEGENALCEKKPNSGAKLHQLLDTSPRTDAVAAG 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5082g00027 416 MobiDBLite consensus disorder prediction 103 135 - -
Pral5082g00027 416 MobiDBLite consensus disorder prediction 13 32 - -
Pral5082g00027 416 SUPERFAMILY Leucine zipper domain 283 339 IPR046347 GO:0003700|GO:0006355
Pral5082g00027 416 MobiDBLite consensus disorder prediction 104 132 - -
Pral5082g00027 416 Gene3D - 283 337 - -
Pral5082g00027 416 MobiDBLite consensus disorder prediction 160 193 - -
Pral5082g00027 416 CDD bZIP_plant_GBF1 285 333 IPR045314 GO:0003700|GO:0006355
Pral5082g00027 416 MobiDBLite consensus disorder prediction 278 312 - -
Pral5082g00027 416 FunFam G-box binding factor 3 283 338 - -
Pral5082g00027 416 Coils Coil 300 355 - -
Pral5082g00027 416 MobiDBLite consensus disorder prediction 153 238 - -
Pral5082g00027 416 Pfam Disordered region downstream of MFMR 132 262 - -
Pral5082g00027 416 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 282 345 IPR004827 GO:0003700|GO:0006355
Pral5082g00027 416 MobiDBLite consensus disorder prediction 1 33 - -
Pral5082g00027 416 MobiDBLite consensus disorder prediction 253 312 - -
Pral5082g00027 416 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Pral5082g00027 416 MobiDBLite consensus disorder prediction 213 228 - -
Pral5082g00027 416 SMART brlzneu 280 344 IPR004827 GO:0003700|GO:0006355
Pral5082g00027 416 Pfam bZIP transcription factor 280 343 IPR004827 GO:0003700|GO:0006355
Pral5082g00027 416 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 287 302 IPR004827 GO:0003700|GO:0006355
Pral5082g00027 416 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 387 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5082g00027 Pral-Chr5082 192663 198528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5082g00027 1 416 bZIP Transcription Factor Family AT2G46270 51.659 1.14e-114 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5082g00027 MFMR_assoc 4.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5082g00027 K09060 - gmx:778133 589.341