Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5082g00026 ATGGGAAACAGTGAGGAAGGGAAATCAACTAAAACTGAAAAACCTTCTTCACCTGTAGCAGTGGACCAGGCTAATCAGGGCAGCCAGCCCAACATTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCTCCATGCCGCCATACTACAACCCAGCTGTGAGTTCTGGCCACCCTCACCCCTACATGTGGCCACCACAGCCCATGATGCCACCGCCATATGGGACTCCTTACGCAGCAATTTATTCACATGGAGGTGTTTATCCTCACCCCTCAATTCCTATAGGACCACAATCACATGGTCAAGGAGTTCCAACGTCACCTGCAGCTGCAACTCCTTTGAACATGGAGACACCAACCAAATCTTCTGGAAACGCCGATCAGGGCCTGATGAAGAAGTTGAAGGGGTTCGATGGGCTTGCAATGTCTATTGGAAATGGCAATGCTGAGAGTGCTGACCGTGGAGCGGAAAACAGGCTGTCACAGAGTTTGGATACTGAGAGTTACAGTGACGGAAGTGACAGCAACACTGCAGGGGCTAATCAAGCAAGCAGGAAAAGAAGCCGTGAGGGAACACCAGCTACTGCAGATGGAGACGGCAAAAGTGGGAAACAAGCAAATCCAGTTTCCAAAGGAGCTGGAGCCTCCAATAAGATGACATCAATTACCCCGGCCAATGTTGGAGGAGCAGTAGTTGGACCTGTAGTTTCTTCTGGTATGACAACAGCGTTGGAGCTGAGGAACCCATCCGTTCTTTCTAAGTCAAATTCCCCAAGTAATCCACAGCCTTGCGCGGTAGTGCCTCCTGAGGCTTGGATACAGAATGAACGGGAGCTGAAGCGGGAGAGGAGAAAGCAATCAAATCGGGAATCTGCTAGACGGTCCCGATTGAGAAAGCAGGCTGAGACAGAAGAACTTGCACGAAAAGTTGAATCCTTGACGTCTGAGAATATTACACTGAAATCAGAAATAAATCGATTGACTGAAAGTTCAGGGAAGCTTAAGATGGAAAATGAGGCGTTAATGGAAAAACTGAAAAATGCACGAGGAGAAAAGGATGAAATCTTTTTGACACCGAGTACGGAGAATTTGCTATCCAGGGTGAACAATTCCAGTTCTTGTGACAATAGAACTATAGAGGGTGAGAACGCTTTGTGTGAGAAGAAGCCAAACTCGGGAGCAAAGCTGCATCAACTATTGGACACAAGTCCGAGGACTGATGCTGTGGCAGCTGGCTGA 1254 0.4833 MGNSEEGKSTKTEKPSSPVAVDQANQGSQPNIHVYPDWAAMQAYYGPRVSMPPYYNPAVSSGHPHPYMWPPQPMMPPPYGTPYAAIYSHGGVYPHPSIPIGPQSHGQGVPTSPAAATPLNMETPTKSSGNADQGLMKKLKGFDGLAMSIGNGNAESADRGAENRLSQSLDTESYSDGSDSNTAGANQASRKRSREGTPATADGDGKSGKQANPVSKGAGASNKMTSITPANVGGAVVGPVVSSGMTTALELRNPSVLSKSNSPSNPQPCAVVPPEAWIQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENITLKSEINRLTESSGKLKMENEALMEKLKNARGEKDEIFLTPSTENLLSRVNNSSSCDNRTIEGENALCEKKPNSGAKLHQLLDTSPRTDAVAAG 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5082g00026 417 MobiDBLite consensus disorder prediction 103 135 - -
Pral5082g00026 417 CDD bZIP_plant_GBF1 286 334 IPR045314 GO:0003700|GO:0006355
Pral5082g00026 417 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Pral5082g00026 417 MobiDBLite consensus disorder prediction 279 313 - -
Pral5082g00026 417 MobiDBLite consensus disorder prediction 13 32 - -
Pral5082g00026 417 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
Pral5082g00026 417 MobiDBLite consensus disorder prediction 104 132 - -
Pral5082g00026 417 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Pral5082g00026 417 MobiDBLite consensus disorder prediction 254 313 - -
Pral5082g00026 417 MobiDBLite consensus disorder prediction 153 239 - -
Pral5082g00026 417 MobiDBLite consensus disorder prediction 214 229 - -
Pral5082g00026 417 Gene3D - 284 338 - -
Pral5082g00026 417 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 388 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pral5082g00026 417 Pfam bZIP transcription factor 281 344 IPR004827 GO:0003700|GO:0006355
Pral5082g00026 417 SUPERFAMILY Leucine zipper domain 284 340 IPR046347 GO:0003700|GO:0006355
Pral5082g00026 417 Coils Coil 301 356 - -
Pral5082g00026 417 MobiDBLite consensus disorder prediction 1 33 - -
Pral5082g00026 417 FunFam G-box binding factor 3 284 339 - -
Pral5082g00026 417 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Pral5082g00026 417 Pfam Disordered region downstream of MFMR 132 263 - -
Pral5082g00026 417 MobiDBLite consensus disorder prediction 160 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5082g00026 Pral-Chr5082 192663 198529 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5082g00026 1 417 bZIP Transcription Factor Family AT2G46270 51.537 1.76e-114 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5082g00026 MFMR_assoc 5.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5082g00026 K09060 - gmx:778133 584.719