Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5082g00003 ATGGAAGAGACCAACGAGTGGGAACAGCTTAGTCTGATCAGTGAGCTAATCCAAGGGAAGGAGTCTGCAGAGCAGCTCTGTACCCGTCTTTCTTCTTCCTCATCTCTTGAAGAGAAGGAGCTCTTGGTAGAAAAAATTCTTTCATCCTATGAGAAAGCTCTCTCCATGCTTAATTGGGGAGTTAATGTGGGAGAGACTTGCGTCATCAATGGCAACATGATGATGGACTCTCTCTGTTCGTTGATTGGTGGCAGCCCCAGAAGCGAGGTCTTGGACCAAGATTTTAACCACAAGGATTCCTCCAAGAAAAGAAAGTCCATGCCTAGATGGACAAAGCAAGTGAAGGCTTGCTCAGGAACAGGACTTGAAGGGTCTCTGGATGACGGTTATAGCTGGAGAAAGTATGGGCAGAAGGATATTCTGGGATCCAAGTTTCCAAGAGGATATTACAGATGTACCCACCGAAATGTACAAGGTTGTCTGGCTACAAAACAAGTTCAAAGATCTGATGATGACTCAACAATTCTTGAGATAACCTACAGAGGAAGACACACATGCACTCAGGCTTCTCATGTGAAGAAGACATTGCCATTAAAAAGAAAGATGGGTCTGATGGAAAATCCAAAGCAGAACCATCGAGATGAACAGAAACCAGTGGGACTAAACCCAGAAGCGTTTCTAAATGTTGGAGCAGAGTTTGAGGTTAAAACAGAGGAACTGGACACAAAGGAGGACATTTTCCCACCCTTTTGCTTCCCTTCTGCGTCAATGGGGTCTGAGGATGAAGACAGTCTATTATTCTCCGAGCCCTTGATGCAAAACCACTTCCTGGAAAGCCTGCCTTCTCCCAAGTTAATCTCACCAGCAACCTCGGAATCGAACATTTTCTGTCTGAATGTGCAGACTTCAGAGTCTGATATCACTGACATAGTTTCAGCTCCAACTTCAGTCACCAATTCCCCAATAGATGATCTGGATCTCTTAGATTTTGACTCCAACTTCCCTTTCAACGTATCAGAACTATTTTCCTGA 1032 0.4448 MEETNEWEQLSLISELIQGKESAEQLCTRLSSSSSLEEKELLVEKILSSYEKALSMLNWGVNVGETCVINGNMMMDSLCSLIGGSPRSEVLDQDFNHKDSSKKRKSMPRWTKQVKACSGTGLEGSLDDGYSWRKYGQKDILGSKFPRGYYRCTHRNVQGCLATKQVQRSDDDSTILEITYRGRHTCTQASHVKKTLPLKRKMGLMENPKQNHRDEQKPVGLNPEAFLNVGAEFEVKTEELDTKEDIFPPFCFPSASMGSEDEDSLLFSEPLMQNHFLESLPSPKLISPATSESNIFCLNVQTSESDITDIVSAPTSVTNSPIDDLDLLDFDSNFPFNVSELFS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5082g00003 343 Gene3D WRKY domain 111 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5082g00003 343 SMART WRKY_cls 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5082g00003 343 Pfam WRKY DNA -binding domain 127 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5082g00003 343 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 301 IPR044810 GO:0003700
Pral5082g00003 343 SUPERFAMILY WRKY DNA-binding domain 125 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5082g00003 343 FunFam WRKY transcription factor 53 112 189 - -
Pral5082g00003 343 ProSiteProfiles WRKY domain profile. 121 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5082g00003 Pral-Chr5082 24177 26659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5082g00003 4 212 WRKY Transcription Factor Family AT5G24110 47.393 6.96e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5082g00003 WRKY 5.7e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5082g00003 - - gmx:100790050 394.045