Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5081g00011 ATGGGATTCGAACCTCAGTCATCAGCATACTCGAACCTCGACTCAATCCTAGTATCTGAGCTGCAAGACAATGAAGAAGCAATTTTGTGTTCCTACACTTCATGGCTAGAAAAGCATCCCTTTGCATTGGACAAGTTTGAGGAAATGATGAGCATTGCTAAAGAAAAAGAGATTGTTGTGTTTTTGGACTATGATGGAACTCTCTCTCCCATTGTTGATGACCCCGATCGCGCTGATATGACTGATGCTATGCGCACAGCAGTAAATGAAGTCGCTTGCTGTTTTCCTACTGCAATTGTCAGTGGAAGGAGTAGACAAAAGGTACGTGAATTTGTGAGGTTGAGAAATGTCTATTATGCTGGAAGCCACGGGATGGATATCTCAACCCCAAAAGGCTCTTCGAAATCTGAAGATCAGAAACATGAGACCAAGGCTGTTGATGAAAAGGGTAACCAAGTAGTTCATTTTCATCCTGCAGAAGAATTCCTGCCAACTATCAAAGAGATAATTCAGGTTCTGAAAGAAAATGTTCCAAGAGTAAAGGGGTCCAAGATAGAGGACAATATGTTCTGCATCACTGTACACTACAGGCTTGTGAAAAATGAAATGGAAGTTGGTATTCTCAGAAAGATGGTGGAGTCTATTATGGAAGCTTACCCCAATTTTCACATATCAGGAGGAAGAAAGGTCATAGAGATACGCCCAAATATAAGTTGGGATAAAGGTTGTGCCGTGCAGTATTTGCTTGGCACTCTTGGCTTTGATAGCTTTGACAAGATCATACCACTGTACATAGGGGATGATACAACTGACGAAGACGCTTTTAAGGTTATAAGACGCATTGGACAAGGTTTTCCGATCATTGTTTCTTCAAAAGCTAAGGAGACCAAAGCTTCTTATTCTCTGCGCGATCCTGATGATGTTTTATCTTTCCTAATGCGTCTTGCTAAGTGGAGGAAAAGCTTGTTATAA 972 0.4126 MGFEPQSSAYSNLDSILVSELQDNEEAILCSYTSWLEKHPFALDKFEEMMSIAKEKEIVVFLDYDGTLSPIVDDPDRADMTDAMRTAVNEVACCFPTAIVSGRSRQKVREFVRLRNVYYAGSHGMDISTPKGSSKSEDQKHETKAVDEKGNQVVHFHPAEEFLPTIKEIIQVLKENVPRVKGSKIEDNMFCITVHYRLVKNEMEVGILRKMVESIMEAYPNFHISGGRKVIEIRPNISWDKGCAVQYLLGTLGFDSFDKIIPLYIGDDTTDEDAFKVIRRIGQGFPIIVSSKAKETKASYSLRDPDDVLSFLMRLAKWRKSLL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5081g00011 323 FunFam Trehalose 6-phosphate phosphatase 159 236 - -
Pral5081g00011 323 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 26 320 IPR044651 GO:0004805|GO:0005992
Pral5081g00011 323 Gene3D - 60 302 IPR023214 -
Pral5081g00011 323 MobiDBLite consensus disorder prediction 126 147 - -
Pral5081g00011 323 MobiDBLite consensus disorder prediction 133 147 - -
Pral5081g00011 323 CDD HAD_TPP 59 308 - -
Pral5081g00011 323 Pfam Trehalose-phosphatase 61 305 IPR003337 GO:0003824|GO:0005992
Pral5081g00011 323 NCBIfam HAD-IIB family hydrolase 60 281 IPR006379 -
Pral5081g00011 323 NCBIfam trehalose-phosphatase 57 317 IPR003337 GO:0003824|GO:0005992
Pral5081g00011 323 Gene3D - 140 236 - -
Pral5081g00011 323 SUPERFAMILY HAD-like 59 318 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5081g00011 Pral-Chr5081 101675 106631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5081g00011 59 316 Trehalose Biosynthesis Gene Families AT1G23870 25.000 2.00e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5081g00011 K01087 - gmx:100799466 447.203