Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00109 ATGGCTAAGTACTCCGATGCTCACATTTGCCAATGTTTGAGTCGATTGTTAACTTCCCGACGAAATCTTCCGGTCACAATTGCCAATGACCGTCACAAAACTGGAGAACAGTTCGTGCATGAAGTAGTAGCGTTGGCCTACGGTCTTCAAGAATTGGGAATTAAAGCAGGCGACGTTGTCGCCATCTCTGCTTACAACAGTGATTTGTATCTGGAGTGGTTATTAGCCATTGCATTTGTTGGAGGGATAGCTTCTCTTCTGAACTATCGATGGAGCATTAAAGAGACAACATTGGCAATTAACTCCGTGAGACCAGTGATGTTGGTTACTGATGAGAGCTGTTACACCTGGTTCATAAACCTCCAAAAAGAGGATACCTCATCTCTTAGGTGGCATGTCTTTATAGGCTCCCCTTCCTCAGATTTTGTCAAGAAGTGGAATGTACTAATTCCAGAATTACTAAAGAAGCATCTCACAAAGCTTCCACCGTTTTGTTACTCCTGGGCTCCTGAAGGCGCTGTCGTAATATGCTTCACCTCAGGAACCACGGGAAAACCCAAGGGAGTCACCCTAAGCCATGCAGCTCTGTTCATACAATCTCTAGCTAAGATCGCCATTGTTGGGTACAGTGAGGATGATATCTATTTGCATAGTGCTCCATTGTGCCATATTGGTGGATTGTCATCGGCAATGGCTATGTTAATGGTTGGCGGTTGCCATGTCTTGATGCCGAAGTTTGACGCTCAATCGGCTGTTGATGCCATAGAGCAATATACTGTCACATCTCTAATCACAGTCCCCGCAATAATGGCTGATATGGTGTCGTTAATTAGGGGCAAGGAGATCTGGAAATGTGGGGAATCCATCAAGAAAATACTTAACGGAGGTGGGAGCCTCTCAAATGAACTAATCATGTACTCCAGTATATTCTTCCCTAAGGCTAAGCTTATATCAGCTTATGGGATGACTGAGGCTTGCTCTTCACTGACATTCCTGACCCTCTATGACGCAACTCAAGAAAAGATTGGTCAGTCCTCTCAGATGGCTGTGAATAGAAGATCTGAGACAATAAAGTACTCCCAAGGGGTTTGTGTTGGCAAGGCTGCTCCCCATGTAGAACTCAGTATATGTGCAGATTCCTCTGGCCATGTTGGGAGAATTTTAACCAGAGGACCACATGTAATGATCCGATATTGGGATCAAACTTCGACAAGCTCATTAGATCCCTCAAATGAAGTCTGGCTTGACACAGGTGACATTGGATCAATTGATCAAAACGGTAATTTGTGGCTCCTGGGGCGAACAAAAGGTCGGATCAAGAGTGGTGGAGAGAACATCTATCCTGAAGAGGTTGAAGCAATTCTTCTGGAACATTCTGGGATTGCTGCTGTAGTAATTGTTGGAATACCTAATGCTCGCTTGTCTGAAATGGTAGTTGCTTGTATCCAACCAAGAAAAGACTGGCAATGGTCAGAGCAGTCTGTTTCAGATGATCATCACTTGTCACCAGAGAATCTTCGGCAATATTGTATAGAAAAGAATTTAAGCAGGTTTAAGATTCCAAAAATGTTTATCCTGTGGAGGAAGCCCTTTCCACTCACTACGACGGGAAAAATAAGGAGAGACCAACTCCGAAAAGAACTCATGTATCAACTACATTCTTTGCATAGCAATATTTGA 1680 0.4375 MAKYSDAHICQCLSRLLTSRRNLPVTIANDRHKTGEQFVHEVVALAYGLQELGIKAGDVVAISAYNSDLYLEWLLAIAFVGGIASLLNYRWSIKETTLAINSVRPVMLVTDESCYTWFINLQKEDTSSLRWHVFIGSPSSDFVKKWNVLIPELLKKHLTKLPPFCYSWAPEGAVVICFTSGTTGKPKGVTLSHAALFIQSLAKIAIVGYSEDDIYLHSAPLCHIGGLSSAMAMLMVGGCHVLMPKFDAQSAVDAIEQYTVTSLITVPAIMADMVSLIRGKEIWKCGESIKKILNGGGSLSNELIMYSSIFFPKAKLISAYGMTEACSSLTFLTLYDATQEKIGQSSQMAVNRRSETIKYSQGVCVGKAAPHVELSICADSSGHVGRILTRGPHVMIRYWDQTSTSSLDPSNEVWLDTGDIGSIDQNGNLWLLGRTKGRIKSGGENIYPEEVEAILLEHSGIAAVVIVGIPNARLSEMVVACIQPRKDWQWSEQSVSDDHHLSPENLRQYCIEKNLSRFKIPKMFILWRKPFPLTTTGKIRRDQLRKELMYQLHSLHSNI 559
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00109 559 Pfam AMP-binding enzyme C-terminal domain 450 538 IPR025110 -
Pral5079g00109 559 CDD AFD_class_I 175 540 - -
Pral5079g00109 559 PANTHER ACYL-COA SYNTHETASE 5 549 - -
Pral5079g00109 559 Gene3D - 2 437 IPR042099 -
Pral5079g00109 559 Gene3D - 438 551 IPR045851 -
Pral5079g00109 559 SUPERFAMILY Acetyl-CoA synthetase-like 8 550 - -
Pral5079g00109 559 Pfam AMP-binding enzyme 23 441 IPR000873 -
Pral5079g00109 559 ProSitePatterns Putative AMP-binding domain signature. 176 187 IPR020845 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral5079g00109 Pral-Chr5079 1263763 1273032 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00109 42 554 Monolignol Biosynthesis Gene Families AT4G19010 27.444 2.57e-42 158
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00109 K14760 - gmx:100809925 813.913