Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00107 ATGTTGGCGATGGAGAAGGATTTTGATTCCAAGTTGAAGATTCAGAGTAGTCCGTCTGGTGATGGGAGTGTCCAGAGATCTCAGAGCATTCCTTTCCGGGCTCCTCAGGAGAATTGCTCCATCCAGGATTTTGAATTGGGAAAGATCTACGGCGTTGGTTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACGGGATCTGTTTATGCATTGAAGATCATGGACAAAAAATTTATCACCAAGGAGAACAAAACAGCTTATGTGAAGTTGGAACGGTTAGTGCTTGATAAATTGGATCATCCTGGCATTGTGCGGCTGTTTTTCACATTTCAAGACACTTTTTCTCTGTACATGGCACTTGAATCCTGTGAAGGCGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGGTTGTCTGAGGATGAAGCACGATTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATACATACATAATTTGGGCTTGATACACCGTGATATTAAGCCGGAGAACTTGCTGCTTACAGCTGAAGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGCCTATGCAGGGTAGCCAAATCATGGACTTCCTTCCAAAAGCAGCATCAGATGATAGAGCCTGCACATTTGTGGGGACAGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCTTCTGCAGCAACATTTGGAAATGACCTCTGGGCCCTTGGATGCACATTATACCAAATGCTCTCGGGAACTTCTCCTTTTAAAGATGCGAGTGAATGGCTAATTTTCCAAAGAATCATAGCTAGAGATATTCAATTTCCTGACTATTTTTCAGATGAGGCAAGGGACCTTATTGACCGGTTACTGTTGAAATTCACTTTTGGCTTTCTTTCTCTGGAAAACCGAGTTCTTTTAGCGGAAGGTGATGCTGAACAATATATAAGTAATAGAGGAAAAGGGGAAGGGAGAGGGAAGGAAAAAAAGTGA 984 0.4248 MLAMEKDFDSKLKIQSSPSGDGSVQRSQSIPFRAPQENCSIQDFELGKIYGVGSYSKVVRAKKKDTGSVYALKIMDKKFITKENKTAYVKLERLVLDKLDHPGIVRLFFTFQDTFSLYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHNLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQGSQIMDFLPKAASDDRACTFVGTAAYVPPEVLNSSAATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIQFPDYFSDEARDLIDRLLLKFTFGFLSLENRVLLAEGDAEQYISNRGKGEGRGKEKK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00107 327 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Pral5079g00107 327 ProSiteProfiles Protein kinase domain profile. 44 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5079g00107 327 SMART serkin_6 44 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5079g00107 327 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 289 - -
Pral5079g00107 327 CDD STKc_PDK1 42 288 IPR039046 GO:0004674
Pral5079g00107 327 SUPERFAMILY Protein kinase-like (PK-like) 26 289 IPR011009 -
Pral5079g00107 327 Gene3D Transferase(Phosphotransferase) domain 1 128 290 - -
Pral5079g00107 327 MobiDBLite consensus disorder prediction 13 29 - -
Pral5079g00107 327 MobiDBLite consensus disorder prediction 1 29 - -
Pral5079g00107 327 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Pral5079g00107 327 Pfam Protein kinase domain 46 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5079g00107 327 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Pral5079g00107 327 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00107 Pral-Chr5079 1205658 1210786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00107 1 290 AGC Kinase Gene Family AT5G04510 83.448 0.0 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Pral5079g00107 Pkinase 1e-61 CL0016