Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00106 ATGTTGGCGATGGAGAAGGATTTTGATTCCAAGTTGAAGATTCAGAGTAGTCCGTCTGGTGATGGGAGTGTCCAGAGATCTCAGAGCATTCCTTTCCGGGCTCCTCAGGAGAATTGCTCCATCCAGGATTTTGAATTGGGAAAGATCTACGGCGTTGGTTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACGGGATCTGTTTATGCATTGAAGATCATGGACAAAAAATTTATCACCAAGGAGAACAAAACAGCTTATGTGAAGTTGGAACGGTTAGTGCTTGATAAATTGGATCATCCTGGCATTGTGCGGCTGTTTTTCACATTTCAAGACACTTTTTCTCTGTACATGGCACTTGAATCCTGTGAAGGCGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGGTTGTCTGAGGATGAAGCACGATTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATACATACATAATTTGGGCTTGATACACCGTGATATTAAGCCGGAGAACTTGCTGCTTACAGCTGAAGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGCCTATGCAGGGTAGCCAAATCATGGACTTCCTTCCAAAAGCAGCATCAGATGATAGAGCCTGCACATTTGTGGGGACAGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCTTCTGCAGCAACATTTGGAAATGACCTCTGGGCCCTTGGATGCACATTATACCAAATGCTCTCGGGAACTTCTCCTTTTAAAGATGCGAGTGAATGGCTAATTTTCCAAAGAATCATAGCTAGAGATATTCAATTTCCTGACTATTTTTCAGATGAGGCAAGGGACCTTATTGACCGGTTACTGGATTTGGATCCCAGCAAGAGACCAGGTGCAGGACCTACTGGTTATACTGTTTTGAAAAGGCATCCATTTTTCAAGGGAGTAAACTGGAGTAACATTAGGGATCAAATCCCCCCAAAACTTGCAATGGAACCGGGGTCACCTGAAGGTGATGATGTTTATGATTCATCATGGAACCTTTCTCATGTTGGTGATGGTCCTGTTAGGCAACCTGATGGAAATATTGGAAACAATTTTTGGATCCCGGCGAATCTGTCATTATGA 1125 0.4311 MLAMEKDFDSKLKIQSSPSGDGSVQRSQSIPFRAPQENCSIQDFELGKIYGVGSYSKVVRAKKKDTGSVYALKIMDKKFITKENKTAYVKLERLVLDKLDHPGIVRLFFTFQDTFSLYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHNLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQGSQIMDFLPKAASDDRACTFVGTAAYVPPEVLNSSAATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIQFPDYFSDEARDLIDRLLDLDPSKRPGAGPTGYTVLKRHPFFKGVNWSNIRDQIPPKLAMEPGSPEGDDVYDSSWNLSHVGDGPVRQPDGNIGNNFWIPANLSL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00106 374 CDD STKc_PDK1 42 312 IPR039046 GO:0004674
Pral5079g00106 374 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 325 - -
Pral5079g00106 374 MobiDBLite consensus disorder prediction 13 29 - -
Pral5079g00106 374 MobiDBLite consensus disorder prediction 1 29 - -
Pral5079g00106 374 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Pral5079g00106 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Pral5079g00106 374 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Pral5079g00106 374 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5079g00106 374 Pfam Protein kinase domain 46 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5079g00106 374 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 327 - -
Pral5079g00106 374 Gene3D Transferase(Phosphotransferase) domain 1 128 328 - -
Pral5079g00106 374 SMART serkin_6 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5079g00106 374 SUPERFAMILY Protein kinase-like (PK-like) 26 339 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00106 Pral-Chr5079 1204416 1210784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00106 1 363 AGC Kinase Gene Family AT3G10540 79.178 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Pral5079g00106 Pkinase 3.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00106 K06276 - cave:132164552 627.091