Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00099 ATGGCACTTTGTGGTATTGCAACTTATTCTAATTCATGTTTTTCAGTGGTCATATTAATGATTCTCTTCTTACATGGCGTTAATGTTCCCTCCTGTTTTGGTTCTTCAGAACCAGAACTGCTGCTCAAGTTTAGGGACTCGTTGGAATACGGAAACAACAGTACTACGTTTTCCAATTGGAATACATCTATTTCGCCGCCGTGTTTCGGTGACCGGTCCAATTGGGTTGGAGTTACCTGTACAAAAGAAGGCAAAATCTCGGGCTTGATACTTGAGAATATGGGACTGAAAGGTCTTATTAATGTGGATGCTCTTCAACAGTTGCCTGATCTCAGAACCCTAAGCTTCATCAACAATGACTTCCATAGTACTTGGCCAGAACTGAACAAGCTAGCGGCTATCAAGACCTTTTATCTTTCGAATAATAAGTTTTACGGAGACATTCCTGCTCAGACTTTTCAGAGTATGAATTGGTTGAAGAAAGTTCATTTGGCGAATAATCAGTTTTCTGGTCAAATTCCCACTTCATTGACCATGTTACCTAAGCTTATGGAGTTGAGATTAGAGGGAAACAAATTCAGCGGCCGAATCCCCAATTTTCTACAGGAGGACTTGAAATCTTTTAGCATTGTGCAACACGAGATTCAATTTTTTTATGATGAGTATGTAGGCAATGAAGGCTTATGTGGAACTCCATTGAGTGCATGTAGTTCTTCCAAAAGCCCCTCAATCATCACTATTGTGGTGATTGCCATAGCGGTGGGCGTGGCAGTGATGATCATAGGGTTACTAATCTTTCTCCTCCGTCGAAGAAAAAGGCGGCAGCCAGCAGAGTCAGTGGAGAATCCACAATCAAGCCAGAGAAAGAAGACTCGTTTCAAGGAAGTAGATGAAGGAAGTAATCACTCAAGAGCATCACAAGTTTCCAACCACAGCAAAAAATCAGAGAACATGAAGTTGTGCTTTGTTAGAAAAGATAGAGAGAGATTTGATTTACAAGACTTGCTAAGAGCCTCAGCTGAAATTTTGGGCAGTGGTAGCTTCAGTTCTTCCTACAAGGCTGCCTTGTTAAATGACTCAATGATGGTGGTGAAGAGGTTTAAGCAAATGAACAACGTCGGGAAGGAAGAGTTTCAGGAACACATGAGGAGGATAGGAAGGTTGGATCACCCTAACTTGCTTCCTCTAGTGGCTTATTATTACAGAAAGGAGGAGAAACTGTTGGTCACAGACTATGTTCAAAATGGTAGCTTGGCACTTCGACTTCATGGACCCCAAGATGTAGGCAAGGCAGGCCTGGATTGGCCAACCCGATTGAAGATTGTGAAAGGAATCACAAAAGGTCTTGAATATCTCTACAAGGAACTACCAAGCCTGGTTGCACCCCACGGACATCTTAAATCTTCAAATGTTCTTCTTACTCAATCTTATGAGCCCCTTTTAACAGACTACGGCTTAGTTCCAGTAATGAACCAAGAACTTGCTCAAGACATGATGGTCATTTATAGGTCACCTGAGTATAGCCAAGAGGGTCAGATTACAAAGAAGAGCGATATATGGAGTCTTGGAGTTCTAATTTTGGAGATAATGAGTGGGAGATTTGCAGGTAAAGGAGGAGAAATGGATTTGGTTAGTTGGGTGAAATGTGTGGAGCCAGAAGATTGGAGCAGTGAGGTTTTGGATAAAGAAATGGGAGGAACAAGGAACAGTGAAGGGGAGATGGTGAAGCTTTTGAGGATTGCCTTGTGTTGTTGTGAAGATGATGTTAATAAGAGACTTAGTTTAAAAGAAGTGGTTGAGAAAATTCAAGAAGTGAGGGAGAAGGATCACGATGATGATTTCTATTCTTCGTATGCTAGTGAAGCAGAAGTTGGTTCTTCAACTGCAATGTCTGATGAAATCAATTTCCCCATAAATGCTTGA 1923 0.4155 MALCGIATYSNSCFSVVILMILFLHGVNVPSCFGSSEPELLLKFRDSLEYGNNSTTFSNWNTSISPPCFGDRSNWVGVTCTKEGKISGLILENMGLKGLINVDALQQLPDLRTLSFINNDFHSTWPELNKLAAIKTFYLSNNKFYGDIPAQTFQSMNWLKKVHLANNQFSGQIPTSLTMLPKLMELRLEGNKFSGRIPNFLQEDLKSFSIVQHEIQFFYDEYVGNEGLCGTPLSACSSSKSPSIITIVVIAIAVGVAVMIIGLLIFLLRRRKRRQPAESVENPQSSQRKKTRFKEVDEGSNHSRASQVSNHSKKSENMKLCFVRKDRERFDLQDLLRASAEILGSGSFSSSYKAALLNDSMMVVKRFKQMNNVGKEEFQEHMRRIGRLDHPNLLPLVAYYYRKEEKLLVTDYVQNGSLALRLHGPQDVGKAGLDWPTRLKIVKGITKGLEYLYKELPSLVAPHGHLKSSNVLLTQSYEPLLTDYGLVPVMNQELAQDMMVIYRSPEYSQEGQITKKSDIWSLGVLILEIMSGRFAGKGGEMDLVSWVKCVEPEDWSSEVLDKEMGGTRNSEGEMVKLLRIALCCCEDDVNKRLSLKEVVEKIQEVREKDHDDDFYSSYASEAEVGSSTAMSDEINFPINA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00099 640 MobiDBLite consensus disorder prediction 276 313 - -
Pral5079g00099 640 SUPERFAMILY Protein kinase-like (PK-like) 341 604 IPR011009 -
Pral5079g00099 640 MobiDBLite consensus disorder prediction 285 301 - -
Pral5079g00099 640 Gene3D Phosphorylase Kinase; domain 1 301 412 - -
Pral5079g00099 640 SUPERFAMILY L domain-like 64 203 - -
Pral5079g00099 640 Gene3D Ribonuclease Inhibitor 33 125 IPR032675 -
Pral5079g00099 640 Gene3D Ribonuclease Inhibitor 126 243 IPR032675 -
Pral5079g00099 640 Pfam Leucine rich repeat N-terminal domain 37 80 IPR013210 -
Pral5079g00099 640 Gene3D Transferase(Phosphotransferase) domain 1 413 624 - -
Pral5079g00099 640 ProSiteProfiles Protein kinase domain profile. 337 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5079g00099 640 FunFam Nuclear pore complex protein NUP107 34 199 - -
Pral5079g00099 640 FunFam pollen receptor-like kinase 1 306 412 - -
Pral5079g00099 640 Pfam Protein kinase domain 340 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5079g00099 640 Pfam Leucine rich repeat 135 193 IPR001611 GO:0005515
Pral5079g00099 640 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 22 609 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00099 Pral-Chr5079 1117889 1121451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00099 12 633 Receptor kinase-like Gene Family AT5G35390 49.168 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral5079g00099 Pkinase 8.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00099 - - pcin:129292199 1029.24