Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00097 ATGGGTATTTGCTTCAGCATTGACTCTGATACGAAGGACCCAGGATATGAATCTGTCACACCAACAGCTAAGCCAGAGAGAAGCAGAAGCTACACTTCATCATCTCCTATGAATATCAAAGATCTCCGCCAAAGTCCTGGTTATGGGAATGTTGATATATTTTCCTATGATGAACTGAGGTTGGCCACCAAGCACTTTCGTCCAGACTTAATTCTGGGAGAGGGTGGTTTTGGAGTTGTGTATAAAGGAGTGATAGATGAAAATGTGAGGCCAGGTTACAAGGCCACACAGGTAGCTATCAAGGAGCTAAATCGAGAAGGAATTCAGGGTGACAGGGAATGGCTGGCTGAAGTCAACTATTTAGGTCAGTTCAGCCACCCAAATCTTGTAAAGCTTATTGGATATTGTTGTGAGGATGAACATCGGTTACTGGTCTATGAATACCTGGCAAGTGGGAGCTTGGAAAAACACCTTTTTCGCAGAGTGGGCTCAATGCTGACTTGGTCAAAAAGAATGAAGATTGCTTTACATGCTGCAAAAGGGCTTGCTTTTCTTCATGGGGCAGAGAGGCCCATCATATATCGCGACTTCAAGACATCAAATATTTTGCTCGATGAGGATTTCAATGCAAAGCTTTCAGACTTTGGTCTTGCAAAGGATGGACCTATGGGAGACCAAACCCATGTTTCAACGCGTGTGATGGGCACATATGGATATGCTGCGCCTGAGTATGTGATGACTGGGCATTTAACAGCTCGAAGTGACGTGTATGGTTTTGGAGTGGTGCTACTTGAGTTGCTTATTGGAAGGAAAGCATTAGACAAGAGCAGGCCCAGCAGACAACACAACTTGGTTGAGTGGGCACGTCCACTGTTGAATCATAATAAGAAGCTCCTTAAAATTTTAGACCCTAGAATGGATGGCCAATATTCATCTAAAAGTGCAATAAAGGTGGCCCATCTAGCAAACCAATGTCTTAGCCAAAACCCAAAAGGCAGGCCTCTGATGAGTCAGGTTGTTGAAATTCTTGAAAATTTTCAGTCAAAGGAGGAAAATGTAGAAGAGCAGATGCTTCGAATTGGCAGTAGCAGTATAACCCTTTATGAGGTTCCAAAGGACGCCAGAGAAACTCCAGCAACTGGGAAAAGCCAATGTGAAAACGATGAGGTTTATAGAAGCGAATGA 1185 0.4371 MGICFSIDSDTKDPGYESVTPTAKPERSRSYTSSSPMNIKDLRQSPGYGNVDIFSYDELRLATKHFRPDLILGEGGFGVVYKGVIDENVRPGYKATQVAIKELNREGIQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYLASGSLEKHLFRRVGSMLTWSKRMKIALHAAKGLAFLHGAERPIIYRDFKTSNILLDEDFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRKALDKSRPSRQHNLVEWARPLLNHNKKLLKILDPRMDGQYSSKSAIKVAHLANQCLSQNPKGRPLMSQVVEILENFQSKEENVEEQMLRIGSSSITLYEVPKDARETPATGKSQCENDEVYRSE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00097 394 ProSitePatterns Protein kinases ATP-binding region signature. 72 101 IPR017441 GO:0005524
Pral5079g00097 394 ProSiteProfiles Protein kinase domain profile. 66 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5079g00097 394 FunFam Serine/threonine-protein kinase BIK1 33 148 - -
Pral5079g00097 394 MobiDBLite consensus disorder prediction 371 394 - -
Pral5079g00097 394 MobiDBLite consensus disorder prediction 1 43 - -
Pral5079g00097 394 CDD STKc_IRAK 72 346 - -
Pral5079g00097 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Pral5079g00097 394 Pfam Protein tyrosine and serine/threonine kinase 72 343 IPR001245 GO:0004672|GO:0006468
Pral5079g00097 394 SUPERFAMILY Protein kinase-like (PK-like) 45 344 IPR011009 -
Pral5079g00097 394 PANTHER OS01G0588500 PROTEIN-RELATED 35 347 - -
Pral5079g00097 394 Gene3D Transferase(Phosphotransferase) domain 1 149 366 - -
Pral5079g00097 394 MobiDBLite consensus disorder prediction 23 41 - -
Pral5079g00097 394 Gene3D Phosphorylase Kinase; domain 1 41 148 - -
Pral5079g00097 394 FunFam Probable serine/threonine-protein kinase PBL8 149 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00097 Pral-Chr5079 1095686 1102601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00097 54 343 Glycoside Hydrolase AT3G07070 50.853 1.70e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral5079g00097 PK_Tyr_Ser-Thr 4.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00097 - - pcin:129292940 734.947