Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00093 ATGGGTGAGGCTTTTGCACAAGGAGCTTTCGGGAAACTATACCGCGGGACTTACAATAATGAAGATGTTGCGATCAAAATATTGGAGAGGCCTGAAAATGATCAAGCAAAGGCCCAGGTGATGGAACAACAGTTTCAGCAGGAGGTCATGATGCTGGCTACACTAAAGCATCCTAATATAGTGCGCTTTATTGGTGCATGCCGTAAGCCAATGGTTTGGTGCATTGTAACGGAATATGCTAAAGGTGGTTCAGTTAGACAGTTTTTAATGAAGCGCCAAAATCGATCAGTTCCCCTTAAATTAGCTGTTAAACAAGCTTTGGATGTTGCCAGGGGGATGGCATATGTTCATGGTCTTCAATTGATCCACAGGGACCTCAAGTCTGACAATCTTTTAATTTTTGGTGACAAATCAATTAAAATTGCAGACTTTGGAGTTGCTCGGATTGAGGTGCAAACCGAAGGAATGACACCTGAGACGGGAACATATCGTTGGATGGCTCCAGAGATGATCCAACACAGGCCTTACACTCAAAAGGTGGATGTATATAGTTTTGGTATTGTTCTTTGGGAGCTCATTACTGGAATGCTTCCATTTCAGAACATGACAGCCGTACAAGCGGCATTTGCAGTCGTCAACAGAAATGTTCGCCCGACCATACCCAACGACTGCTTACCCATTCTCCGAGACATCATGACAAGATGCTGGGATCCCAACCCTGACGTTAGGCCACCTTTTACTCAAATCGTGGCGATGCTAGAGAATGCAGAGACCGAGATCATGACGACTGTTCGTAAGGCCCGTTTTCGGTGTTGCATGACGCAACCCATGACATCTGACTGA 843 0.4531 MGEAFAQGAFGKLYRGTYNNEDVAIKILERPENDQAKAQVMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLMKRQNRSVPLKLAVKQALDVARGMAYVHGLQLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNRNVRPTIPNDCLPILRDIMTRCWDPNPDVRPPFTQIVAMLENAETEIMTTVRKARFRCCMTQPMTSD 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00093 280 FunFam Serine/threonine-protein kinase isoform 1 1 81 - -
Pral5079g00093 280 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Pral5079g00093 280 Pfam Protein tyrosine and serine/threonine kinase 2 253 IPR001245 GO:0004672|GO:0006468
Pral5079g00093 280 PRINTS Tyrosine kinase catalytic domain signature 161 171 IPR001245 GO:0004672|GO:0006468
Pral5079g00093 280 PRINTS Tyrosine kinase catalytic domain signature 180 202 IPR001245 GO:0004672|GO:0006468
Pral5079g00093 280 PRINTS Tyrosine kinase catalytic domain signature 224 246 IPR001245 GO:0004672|GO:0006468
Pral5079g00093 280 PRINTS Tyrosine kinase catalytic domain signature 115 133 IPR001245 GO:0004672|GO:0006468
Pral5079g00093 280 PRINTS Tyrosine kinase catalytic domain signature 77 90 IPR001245 GO:0004672|GO:0006468
Pral5079g00093 280 FunFam serine/threonine-protein kinase HT1 82 275 - -
Pral5079g00093 280 SUPERFAMILY Protein kinase-like (PK-like) 5 253 IPR011009 -
Pral5079g00093 280 Gene3D Transferase(Phosphotransferase) domain 1 82 277 - -
Pral5079g00093 280 CDD STKc_MAP3K-like 6 253 - -
Pral5079g00093 280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Pral5079g00093 280 ProSiteProfiles Protein kinase domain profile. 1 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5079g00093 280 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 5 256 - -
Pral5079g00093 280 PIRSF ILK 1 272 - -
Pral5079g00093 280 SMART serkin_6 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00093 Pral-Chr5079 1070064 1082757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00093 1 280 MAP Kinase Kinase Kinase AT2G24360 86.786 2.62e-179 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral5079g00093 PK_Tyr_Ser-Thr 9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00093 - - gmx:100788536 537.339