Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00079 ATGGCTGCAAGTTTTGCATCTAAATGCTCTCGTGTGGGACATTCTCTGCTTGGTGGGCTCGGCAATAGTTTATCTGGTTTAGTCACAACATCACAAGAGATCGTAAGCAGCAAATTCTTGTCTCAGCAGCAGCAACAGTTGCGCTCTTTCATACAGATGAGGACTGTTCTCAAGGTCGTGGATAATTCTGGGGCTAAGAAGGTTATGTGCATACAACCTCTAAAAGGGAGGAAAGGTGCAAGATTGGGTGACACCATAATTGCATCAGTAAAGGAAGCCCATCCTAATGGAAAAGTTAAGAAAGGAAAAGTTGTGTATGGCGTCGTCGTCCGCGCAGCAATGCAAAGGGGGCGATGTGATGGCAGTGAGGTCAAGTTTGATGATAATGCTGTGGTGCTTGTTGACAAGCAAGGGCAGCCGATTGGGACAAGAGTTTTTGGACCAGTCCCACATGAGCTGAGGATGAAGAAACATGTCAAAATACTCACTTTAGCGGGGCACATTGCTTAA 510 0.4608 MAASFASKCSRVGHSLLGGLGNSLSGLVTTSQEIVSSKFLSQQQQQLRSFIQMRTVLKVVDNSGAKKVMCIQPLKGRKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRMKKHVKILTLAGHIA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00079 169 NCBIfam 50S ribosomal protein L14 51 168 IPR005745 GO:0003735|GO:0006412|GO:0015934
Pral5079g00079 169 ProSitePatterns Ribosomal protein L14 signature. 107 133 IPR019972 -
Pral5079g00079 169 SUPERFAMILY Ribosomal protein L14 51 168 IPR036853 GO:0003735|GO:0005840|GO:0006412
Pral5079g00079 169 SMART Ribosomal_L14_2 50 169 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pral5079g00079 169 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 51 168 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pral5079g00079 169 Pfam Ribosomal protein L14p/L23e 51 168 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pral5079g00079 169 Hamap 50S ribosomal protein L14 [rplN]. 50 169 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pral5079g00079 169 Gene3D Ribosomal protein L14 50 169 IPR036853 GO:0003735|GO:0005840|GO:0006412
Pral5079g00079 169 FunFam 50S ribosomal protein HLP, mitochondrial-like 50 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00079 Pral-Chr5079 925663 928590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00079 61 152 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.364 4.04e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00079 K02874 - qsa:O6P43_012997 252.292