Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00067 ATGTCTTCCGATTTAGATGAGTGCCGGGAACACCTGCTAGTGGTAGATGTGAATGGTCAGACTCAGATTGACGAGCCTCCCAAATTTCGGATTCGAAATCTCACCAAAGTCTCCGATGCCGGAGTTCCGATTCTCAAGGGCGTTGACTTGGACGTTCCCAAGGGCGTGATACTCGGCGTCGTTGGACCCAGTGGTAGCGGCAAATCGACGCTTCTCAGGGCCTTCAACCGTCTCTGGGAGCCTCCCTCCGGCACCGTCTTCCTCGATAATAACGATATCTGCGATCTCGATGTTCTGTCCCTCCGCCGTAATGTCGGCATGCTCTTTCAGCTCCCTGCCCTCTTCGAAGGCACAGTGGCAGACAATGTGAGGTATGGACCACAACTAAGAGGGAAAAAGCTAACTGATGAAGAAGTACGCAGGTTGCTGATAACAGCAGACCTTGATGCTTCTTTGATGAGCAGGAAGGGCTCTGAACTCTCTGTGGGTCAAGCTCAACGAGTTGCACTTGCCAGGGCTTTAGCTAATTCCCCTGAGGTTTTACTGCTGGATGAGCCAACCAGTGCACTAGATCCAATATCAACAGAGAACATAGAAGGTGCCCTAATGAAGCTGAACAAGAACAGTGGTATGACAGTGATAATTGTCTCTCACAGCATCAAACAGATACAGAGGATAGCTGACTTGGTGTGCCTAGTTGTTGATGGTCAAATAGTTGAAGTTTTAAAGCCTGATCTACTGTCACAAGCCACGCATCCCATGGCCCAAAGGTTTCTTCAACTTAGTTCTTAG 792 0.4937 MSSDLDECREHLLVVDVNGQTQIDEPPKFRIRNLTKVSDAGVPILKGVDLDVPKGVILGVVGPSGSGKSTLLRAFNRLWEPPSGTVFLDNNDICDLDVLSLRRNVGMLFQLPALFEGTVADNVRYGPQLRGKKLTDEEVRRLLITADLDASLMSRKGSELSVGQAQRVALARALANSPEVLLLDEPTSALDPISTENIEGALMKLNKNSGMTVIIVSHSIKQIQRIADLVCLVVDGQIVEVLKPDLLSQATHPMAQRFLQLSS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00067 263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 248 IPR027417 -
Pral5079g00067 263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 260 IPR003439 GO:0005524
Pral5079g00067 263 FunFam ABC transporter, ATP-binding protein 26 258 - -
Pral5079g00067 263 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 1 262 IPR005670 GO:0005315|GO:0016020|GO:0035435
Pral5079g00067 263 SMART AAA_5 54 245 IPR003593 GO:0016887
Pral5079g00067 263 CDD ABC_PstB_phosphate_transporter 29 247 IPR005670 GO:0005315|GO:0016020|GO:0035435
Pral5079g00067 263 ProSitePatterns ABC transporters family signature. 160 174 IPR017871 GO:0005524|GO:0016887
Pral5079g00067 263 Gene3D - 25 262 IPR027417 -
Pral5079g00067 263 Pfam ABC transporter 45 188 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00067 Pral-Chr5079 817708 821601 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00067 42 261 Calmodulin-binding Proteins AT2G36910 34.211 1.89e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00067 K02068 - qsa:O6P43_007813 394.43