Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00035 ATGTTAATTTCAAAGAGACTCTTCGTCTTCCTCATGCTCTATCTTGCTCTTACAATTTTAGCTCACGGACAGCAACAAAGAGGTTTTGTAAGCATTGATTGTGGCGGTCCAGAGAATTTTGAATATACGGATGATACCACTAAGATAAAGTATGGCACAGATGGAGCTTATATTAACAAAGGGGTCAACAGAAATGTTTCCTCTGAATATAACTACCCAAAAGTTCCAAATCTGCCACAACCGCTTTCAGATCTCAGAAGTTTTCCTGAGGGTGAGAGGAATTGTTACAAAATAAAATCTCCAATAAGAAACAGTTTGCATTTGATAAGGGCTTCTTTCTTGTATGGAAACTATGATGGAGAGAACAAACTTCCAGAATTTGATCTCTATGTGGATGTGAATTTCTGGTCCTCAGTAACATTCAGAAATGCTTCAGAGCAACTCGTAATGGAAATCATCAGCTTGAAAGTATCAGAGGATATCAATGTTTGTCTTGTGAACAAAGGATTGGGAATTCCTTTCATCTCAGCTTTGGAACTAAGACCAATTATTCAGGGCTCTATTTATACTACTGAGTTTGGTTCATCTGCTTCACTTTTACTCTTCAAAAGATGGGACATTGCATCTCTCAATGAAAGTGGAAGATATGAAGACGATAATTATGATAGGATTTGGTCTCCTTACGGTTCATCTTCCTGGGAGACTTTGGAAACTTCTTCAGCCATCAATGGTAATAACAGTGGCTATAATGCGCCATTTGAAGTCATTAGGACTGCTGCTAGACCTAAGAATGAGAGTGCTCCTTTGGAATTCTCCTGGAAACCGAATGATCCAAACTCTAAATTTTATGTTTACTTGTACTTTGCTGAAGTTGAGAAGCTTCAGAAAAAGCAACTGAGGAAATTCAATATATCCTGGAATGGAACTCCATTATTTGGACCCTTTGTCCCTAGTTACTTACAGGCAACCACTGTGTCAAATTCGAAATCCTTAGTGGGAAATAAACATCAAATTTCAATTTCTAGAACAGGAGACTCAGCCTTACCACCCATCCTCAATGCAGTTGAGATTTATGTGGTAAGACAGCTAGATGCAATACCAACTTTTGAGCAAGAAGTTGATGCTATCATGAATGTCAAAGCAACATATGTTATTCAAAGAAATTGGGTAGGTGATCCTTGTGAGCCAAAGGACTACAGTTGGGATGGCTTGGAATGTAACTACAGTAACTCGCTTCCTCCCCGAATCATATCACTGAATTTGAGCTCAAGCAGTTTGAGTGGGGTAATAGCTTCTGCAATTTCCAATCTCTTGTCACTGGAATCACTGGATTTATCAAACAATAGCTTGACTGGATCAATACCTCAGTTTCTGGAAGACTTCAAATCTCTTAAAGTTCTGAACTTGAAAGGCAATCATCTGTCAGGTTCGGTCCCCGGTCATCTTCTGGAAAGATCAAGAGCTGGGTTACTTACACTGAGTTTGGATGACCAAAATATTTGTGGTTCAAGTACGTGCAAAAAGAAGAAGAATATTGCTGTTCCCATAGCCGTTTCTATATCATCAGTTCTCGTTCTGTTGATTGCATTTGCTCTTATCTGGAAATTAAGAAGGAAAAAGCCATCAGATAAGGAGATAGAAAAGGCCAACAAAGGTGGAAGAACTGTAGCATCAAAAAAGTGGCAATATAGCTATGAGGAGGTTTTGGAAATCACCAACAACTTTGAAATGGCAATTGGAAAAGGGGGATTTGGAATAGTGTACCGTGGTGAGTTGAAAGATAGGAACCAAGTTGCAGTGAAAATGCTTTCTCCATCATCATCTCAGGGGCCAAAGGAATTTCAAACTGAGGCTGAGCTGTTGATGACAGTTCATCATAGAAATTTGGTATCCTTCATTGGTTACTGTGATGATGATAACAAGATGGCACTCATTTATGAGTACATGGCTAATGGCAACCTGAAAAATTATCTCTCAGATAAAAACTCAAATACTTTGACTTGGCAAAAAAGACTTGAGATAGCAATTGATGCGGCACAAGGATTGGAATATCTACACCATGGATGCAAGCCACCTATAATACACAGAGATGTGAAGACAGCCAACATTCTATTAAATGAAAACTTGGAAGCTAAGATAGCTGATTTTGGCCTCTCCAAGGTGTTTAAGAATGATAACACTAACGCTAATGCAGAGTCTGAAGTCATGGGCACCACAGGCTACCTTGATCCAGAGTACTACAAGTTACGAAACTTGAATGAGAAAAGTGATATTTATAGTTTTGGAATAGTTATTCTAGAGCTAGTAACAGGTCAACCAGCAGTGATAAAAGGTGAAGAACTGGTTCACATAACTGCATGGGTAACATACGAACTTAAAAGAGGGGATTTTAGCAGAATTGTGGATCCAAGACTTGAAGGCCAATTCAATGCAGGCTCTGTGCAAAAGGCTTTTGAAATAGCAATGGCATGTAGTTCATCACCCTCCATTCACAGACCCACCTTGAATTTTGTGGTACAAGAGCTGAAAAAGTGTTTGGAAATGGAGTTGCCTTCTCAAAGTGACAGATTCGAGGTGGTACCAAGACAGATTTCTTGCGAGATATATAGTTCGTCTGAGCCTTATTCCTATGATACTGATTCTATCACTTCTCCTTTTGCTAGATAA 2667 0.3903 MLISKRLFVFLMLYLALTILAHGQQQRGFVSIDCGGPENFEYTDDTTKIKYGTDGAYINKGVNRNVSSEYNYPKVPNLPQPLSDLRSFPEGERNCYKIKSPIRNSLHLIRASFLYGNYDGENKLPEFDLYVDVNFWSSVTFRNASEQLVMEIISLKVSEDINVCLVNKGLGIPFISALELRPIIQGSIYTTEFGSSASLLLFKRWDIASLNESGRYEDDNYDRIWSPYGSSSWETLETSSAINGNNSGYNAPFEVIRTAARPKNESAPLEFSWKPNDPNSKFYVYLYFAEVEKLQKKQLRKFNISWNGTPLFGPFVPSYLQATTVSNSKSLVGNKHQISISRTGDSALPPILNAVEIYVVRQLDAIPTFEQEVDAIMNVKATYVIQRNWVGDPCEPKDYSWDGLECNYSNSLPPRIISLNLSSSSLSGVIASAISNLLSLESLDLSNNSLTGSIPQFLEDFKSLKVLNLKGNHLSGSVPGHLLERSRAGLLTLSLDDQNICGSSTCKKKKNIAVPIAVSISSVLVLLIAFALIWKLRRKKPSDKEIEKANKGGRTVASKKWQYSYEEVLEITNNFEMAIGKGGFGIVYRGELKDRNQVAVKMLSPSSSQGPKEFQTEAELLMTVHHRNLVSFIGYCDDDNKMALIYEYMANGNLKNYLSDKNSNTLTWQKRLEIAIDAAQGLEYLHHGCKPPIIHRDVKTANILLNENLEAKIADFGLSKVFKNDNTNANAESEVMGTTGYLDPEYYKLRNLNEKSDIYSFGIVILELVTGQPAVIKGEELVHITAWVTYELKRGDFSRIVDPRLEGQFNAGSVQKAFEIAMACSSSPSIHRPTLNFVVQELKKCLEMELPSQSDRFEVVPRQISCEIYSSSEPYSYDTDSITSPFAR 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00035 888 Pfam Malectin-like domain 32 359 IPR024788 -
Pral5079g00035 888 Gene3D Phosphorylase Kinase; domain 1 546 648 - -
Pral5079g00035 888 Gene3D Transferase(Phosphotransferase) domain 1 649 863 - -
Pral5079g00035 888 ProSitePatterns Protein kinases ATP-binding region signature. 579 601 IPR017441 GO:0005524
Pral5079g00035 888 Pfam Protein tyrosine and serine/threonine kinase 576 842 IPR001245 GO:0004672|GO:0006468
Pral5079g00035 888 FunFam Leucine-rich repeat receptor-like kinase 371 502 - -
Pral5079g00035 888 SMART serkin_6 573 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5079g00035 888 CDD STKc_IRAK 579 844 - -
Pral5079g00035 888 Pfam Leucine rich repeat 418 474 IPR001611 GO:0005515
Pral5079g00035 888 ProSiteProfiles Protein kinase domain profile. 573 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5079g00035 888 FunFam Leucine-rich repeat receptor-like protein kinase 550 648 - -
Pral5079g00035 888 PANTHER OS07G0107800 PROTEIN-RELATED 30 846 - -
Pral5079g00035 888 Gene3D Ribonuclease Inhibitor 370 488 IPR032675 -
Pral5079g00035 888 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 649 854 - -
Pral5079g00035 888 SUPERFAMILY Protein kinase-like (PK-like) 559 842 IPR011009 -
Pral5079g00035 888 SUPERFAMILY L domain-like 388 503 - -
Pral5079g00035 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00035 Pral-Chr5079 546617 550839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00035 9 860 Receptor kinase-like Gene Family AT4G29180 54.233 0.0 893
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral5079g00035 Malectin_like 7.7e-105 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00035 - - pcin:129292167 1495.33