Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5079g00029 | ATGACACGCCGACCAAAAATATCTTCGATACACTATCAGTGGACTTATGATGTCTTCCTCAACTTTAGAGGTGAAAATACTCGTCATGGTTTTATAGGAACTTTGAATAAAGAGCTCAATCAAAAGGGAGTTCGCACCTTCTTTGATGATCAGGAAATAGGAATAGGGGAAGAAATTACACCGACGCTTCTCAGAGCAATCCAAGAATCTAGGATGGCTATTACTGTTTTTTCTGAGGAGTATGCTTCCTCAACATTTTGTCTAAAGGAATTAGTCCAAATCCATCAATGTATTAAGGAAAATGGTCGACTAGTTTGGCCAGTTTTTTATGATGTGGAGCCTTCTGTAGTAAGACATCAAAGAGGAAAATATGGAGAAGCACTAGTTACACATCAACAAAACTCAAAGGCTGATGAAGAAGAGGTTGAAAGTTGGAAGCGTGCACTACGTGAAGTAGCTAATCTTAAAGGCTCATCATATGATCCAAGGAAAGATTATGAGCATAAACTCATTGAAGAGATTGTGAACCACATCTTTGAGATAATCAGAAGGGACCCTCTTGATGTTGCCGAATATCTAGTTGGTTTAAATTCTCGTATGCAAAAAATAAATGATCTACTGCAAATTGGGTTAAATGATGAGGTCATCATGATAGGAGTTTATGGAAATGGGGGAACGGGTAAAACAACAATCACACGTGCTGTGTATAATGCAATTGCTGATAATTTTGATCACTTGTGCTTTCTTGGAGATATCAAAGGGGGATCTGGAAAACATGGCCTAGAACAACAGCAAGCCAGAATGCTTTCAAAAATTTTAGGGCGGAAGATAGAAATTGAAGACATTGATGAAGGAGTTGAACTCATAAAACGAGCACTCAGAGATAAGAAAATTCTGTTGATTCTTGATAATGTAGATGAACGAATACAGTTACGAAAGTTAGCTGGGGCATGTGAATGGTTTGGTCGGGGGAGCAGGATCATTATAACAACAAGAGATTTACATTTACTTAAGAGTCATGGGATTGAAAGAAGATATGAAATGGAGGGATTAAATCATGAAGAGTCTCTTGAATTGTTAAGTTGGAATGCCTTTGGGAAGATGCAAGTTGATGATCCAAGGTACACAGAAGTTGTGAATGAGGTGATAAGTTATGCCAGTGGTCTTCCCTTGGCCCTTGAAATATTGGGCTCTGATTTGTATGGTAAGAATGTAAGTGAGTGGAAATCTATGTTGGATGGATGTAAAAGCATCCCTCATGGTAAGATTCAACAAATATTAGAAGTAAGCTATAAAAGCTTACAACAACTTGAAAAAGAAGCTTTTCTTGATATTGCTTGCTTCTACAAAGGTCGTGAATTGGAATATGTCAAAAAGATGGTGGCAATTGCTCATGATTTTGACCCAGATTATCATATTGGAGTGTTGGAAGACAAATGCCTTATAAAGATTTATGGGGCCTGTATTGGAATGCACGATCTAGTACAAGATATGGGGAGAGACATCGTTCGTCTACAATCACCAAAAGATCCAGGAAAACGCAGTAGGCTATGGTCAAATAAAGATATCTTGCGTGTTTTGGAGAGAAATGAGGGCACAGATGAAGTTATTATCATAATTCAACTTGAAAGGTCCGAATGCATAGAAGTAAAATGGAATGGAAGAGCCTTCAAGAGTATGAACAATCTCAAAATTCTTATTCTTGACGATACAAAATTTTCACAAGGTCCCAAATATCTTCCCAATAGTTTAGCAGTATTGAGATGGCCAGGATACCCTTCATCAAGTTTGCCACGTGGTTTTCGTGCAAAGGATCTTGTTGAATTCAATGTGAGAGATAGTTGTTTCAATTCAACGGAAATCAGTAAGATAACGCAGAATATGAAAATGAGTGTTTTGAACTTTGAAGGGTGCGAGTATATCATTCACATACCTGATTTATCAGGCCTCTCAAGTTTAAAGGAGTTACGGCTTCGTAATTGCAAAAATCTGATTGAAATTGATAATTCGGTTGGGCAATTAGCAAAACTTGGAACTTTGGATGTACGTAACTGTGCGCAGCTTACGACTTTTCCAAGTGCATTGAATACACCCTCTCTTTATTATCTGAATATGAAGATGTGCTCAAGTTTGAATTGCTTTCCAGAAATAGCAACTCGTGAAATGAAAATAGAAGTGTTGAATTTGGTTGGAACTGGTATAAATCAATTGCCTCCATCAGTTGAAAATCTTACTCAACTTGTAGAGATAACACATGTTAGAGATGACACTACGGGCAAGGGAATTAGGTCAATGAAGCTACCAAGTAGCACTTTTTTGTTGCCAGAACTTGAGAAGATAGATGTTGAAGGATGCGAAGAGTTGCTTATGGAAGTGGAGTCAATGATATGTCCAAACATAGGACATCTTGAACTACAAAGATGTAATATATCCAATGAGAGCCTTCAAATTTATCTTACTTCATTCCCCAATCTTTGGTTTTTGGACTTGAGCGGCAATGATTTCACAATTTTGCCCGCATGCATAGAACATTGTCAAAATTTGGGAATAATTAAGCTCCGTCAATGCAAGCATCTAATAGAAGTGGAAAAGGTTCCGCCTAGCATAACATATTTGATGGCAGAAGATTGTGTATCAATGAGTTCAGAGTCCAAAAAGTTATTATTGAGTAAGGAGTTACTTGCATCTGTAGTGCCCATCAACATTAAAGTTGAAGGTTTGTATGGCTACCCTTCTGCAGACTATTTTTGTGTGCCAGGGGGAAGCATCCCGGAATGGTTCGATCACTGTAACAAAGGACGGTCCATTTCTTTTTGGTTTCGTGACCACCAACTCCCATCTCTCTGTGTTTGTGCTATTGCTCAACAAATGGAGTATCATGAATCGATCCTAACAAAAGTGTTCATAAATGATGAAATGGCGTATGGATATCACCTGCCGCTACCGACTGCGGGATATGATGTGGATCATATAATTATGCATTATATATGGAATGTCGATGTGGATAAAGAAATTAAAGAAAATCAATGGAATCATGTAAAGATTTGTCCGCTTTCAGGGCTTGGAGATGCCGTAAAAGAGAGCGGAATTTATGTTCTTAGAGATGAATGGACCAATATGAAAAATGTTCGATTCTCCGATCCTTTCCAAAGTCTGGATTTTTCAAGGAGTGGCCGAGGATGTGCTACAGAAGGTGACATTGCTGCAAATAACTCCTTCTTCCCTTCCCAAAGTGAGCAGCAACATACACACTCACATACTGTTAGGGACATTGACTCGTTAAGAATACTATCTGTACAGTGTAGGAGAATTATATTTCCCATCACAATTCATAAGTATAGTGGGATGATGGGTTCTCAATTAGGATATGATTTCTATATTACTAAGCAAGATTATTTATATATTACTGAGCAAGATGTCATGAAATTCCTAAGCATGCAAGAGCTGTCCATAACCATTATCCAACTCTTTGTGAGGTTTTGCTGCGAACTTTGCTTCTTTAGAGGAATTGTGGATAGATTTGGATTTTTGTGTCCAAATGCTATTCAAGGTGTAGGGCATACACGAGAAGACAAGATATCTTACATAGGAAGTACTATCAAGGAAGGCAATAATCAATGTTGGCTTGCACCAATTCGTGAAGGGAACCATTGGACATTATGTGCTGTTTGCCCAGGCTCGAATATCATTCATTGGTTTGATTCACTCGGAGGCAAACAAAGCGATGATATTGAGAAAGTATTCACCGAAGCCCTTGTGACGTACCAAATCACTGGAGGAGAGAACATAAAATGGCTATACCCAAAGTATCGTCGTCAACTTGAAGATAAAGAAGGTGGATATTACATCATGAGATATATGTATGACATCATCGATCTTAACGAAGTTGACTCATTAGACATGGTGGTCAGCCTATTTTTTGGCGTCTCCGTGGCCGCGGCGGTGGCCGCAGCGGTGGCGGTGGCCGTGGTGGCAGTAGTGGCGGTGACAGATGTTAAATAA | 4002 | 0.3876 | MTRRPKISSIHYQWTYDVFLNFRGENTRHGFIGTLNKELNQKGVRTFFDDQEIGIGEEITPTLLRAIQESRMAITVFSEEYASSTFCLKELVQIHQCIKENGRLVWPVFYDVEPSVVRHQRGKYGEALVTHQQNSKADEEEVESWKRALREVANLKGSSYDPRKDYEHKLIEEIVNHIFEIIRRDPLDVAEYLVGLNSRMQKINDLLQIGLNDEVIMIGVYGNGGTGKTTITRAVYNAIADNFDHLCFLGDIKGGSGKHGLEQQQARMLSKILGRKIEIEDIDEGVELIKRALRDKKILLILDNVDERIQLRKLAGACEWFGRGSRIIITTRDLHLLKSHGIERRYEMEGLNHEESLELLSWNAFGKMQVDDPRYTEVVNEVISYASGLPLALEILGSDLYGKNVSEWKSMLDGCKSIPHGKIQQILEVSYKSLQQLEKEAFLDIACFYKGRELEYVKKMVAIAHDFDPDYHIGVLEDKCLIKIYGACIGMHDLVQDMGRDIVRLQSPKDPGKRSRLWSNKDILRVLERNEGTDEVIIIIQLERSECIEVKWNGRAFKSMNNLKILILDDTKFSQGPKYLPNSLAVLRWPGYPSSSLPRGFRAKDLVEFNVRDSCFNSTEISKITQNMKMSVLNFEGCEYIIHIPDLSGLSSLKELRLRNCKNLIEIDNSVGQLAKLGTLDVRNCAQLTTFPSALNTPSLYYLNMKMCSSLNCFPEIATREMKIEVLNLVGTGINQLPPSVENLTQLVEITHVRDDTTGKGIRSMKLPSSTFLLPELEKIDVEGCEELLMEVESMICPNIGHLELQRCNISNESLQIYLTSFPNLWFLDLSGNDFTILPACIEHCQNLGIIKLRQCKHLIEVEKVPPSITYLMAEDCVSMSSESKKLLLSKELLASVVPINIKVEGLYGYPSADYFCVPGGSIPEWFDHCNKGRSISFWFRDHQLPSLCVCAIAQQMEYHESILTKVFINDEMAYGYHLPLPTAGYDVDHIIMHYIWNVDVDKEIKENQWNHVKICPLSGLGDAVKESGIYVLRDEWTNMKNVRFSDPFQSLDFSRSGRGCATEGDIAANNSFFPSQSEQQHTHSHTVRDIDSLRILSVQCRRIIFPITIHKYSGMMGSQLGYDFYITKQDYLYITEQDVMKFLSMQELSITIIQLFVRFCCELCFFRGIVDRFGFLCPNAIQGVGHTREDKISYIGSTIKEGNNQCWLAPIREGNHWTLCAVCPGSNIIHWFDSLGGKQSDDIEKVFTEALVTYQITGGENIKWLYPKYRRQLEDKEGGYYIMRYMYDIIDLNEVDSLDMVVSLFFGVSVAAAVAAAVAVAVVAVVAVTDVK | 1333 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5079g00029 | 1333 | Gene3D | - | 10 | 186 | IPR035897 | - | |
Pral5079g00029 | 1333 | Gene3D | Ribonuclease Inhibitor | 724 | 908 | IPR032675 | - | |
Pral5079g00029 | 1333 | SMART | till_3 | 15 | 155 | IPR000157 | GO:0007165 | |
Pral5079g00029 | 1333 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 16 | 718 | IPR044974 | GO:0006952 | |
Pral5079g00029 | 1333 | Pfam | TIR domain | 16 | 179 | IPR000157 | GO:0007165 | |
Pral5079g00029 | 1333 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 183 | 445 | IPR027417 | - | |
Pral5079g00029 | 1333 | SUPERFAMILY | L domain-like | 542 | 890 | - | - | |
Pral5079g00029 | 1333 | PRINTS | Disease resistance protein signature | 217 | 232 | - | - | |
Pral5079g00029 | 1333 | PRINTS | Disease resistance protein signature | 648 | 664 | - | - | |
Pral5079g00029 | 1333 | PRINTS | Disease resistance protein signature | 386 | 400 | - | - | |
Pral5079g00029 | 1333 | PRINTS | Disease resistance protein signature | 292 | 306 | - | - | |
Pral5079g00029 | 1333 | SUPERFAMILY | Cysteine proteinases | 1114 | 1290 | IPR038765 | - | |
Pral5079g00029 | 1333 | Gene3D | - | 187 | 343 | IPR027417 | - | |
Pral5079g00029 | 1333 | SUPERFAMILY | "Winged helix" DNA-binding domain | 422 | 528 | IPR036390 | - | |
Pral5079g00029 | 1333 | Gene3D | Adenoviral Proteinase; Chain A | 1116 | 1304 | - | - | |
Pral5079g00029 | 1333 | ProSiteProfiles | TIR domain profile. | 14 | 182 | IPR000157 | GO:0007165 | |
Pral5079g00029 | 1333 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 9 | 157 | IPR035897 | - | |
Pral5079g00029 | 1333 | Pfam | NB-ARC domain | 200 | 436 | IPR002182 | GO:0043531 | |
Pral5079g00029 | 1333 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 12 | 184 | - | - | |
Pral5079g00029 | 1333 | Gene3D | - | 350 | 435 | IPR042197 | - | |
Pral5079g00029 | 1333 | Gene3D | Ribonuclease Inhibitor | 552 | 723 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5079g00029 | Pral-Chr5079 | 448672 | 456002 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5079g00029 | 5 | 887 | WRKY Transcription Factor Family | AT4G12020 | 27.594 | 2.68e-68 | 252 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5079g00029 | - | - | pcin:129312441 | 985.326 |