Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00029 ATGACACGCCGACCAAAAATATCTTCGATACACTATCAGTGGACTTATGATGTCTTCCTCAACTTTAGAGGTGAAAATACTCGTCATGGTTTTATAGGAACTTTGAATAAAGAGCTCAATCAAAAGGGAGTTCGCACCTTCTTTGATGATCAGGAAATAGGAATAGGGGAAGAAATTACACCGACGCTTCTCAGAGCAATCCAAGAATCTAGGATGGCTATTACTGTTTTTTCTGAGGAGTATGCTTCCTCAACATTTTGTCTAAAGGAATTAGTCCAAATCCATCAATGTATTAAGGAAAATGGTCGACTAGTTTGGCCAGTTTTTTATGATGTGGAGCCTTCTGTAGTAAGACATCAAAGAGGAAAATATGGAGAAGCACTAGTTACACATCAACAAAACTCAAAGGCTGATGAAGAAGAGGTTGAAAGTTGGAAGCGTGCACTACGTGAAGTAGCTAATCTTAAAGGCTCATCATATGATCCAAGGAAAGATTATGAGCATAAACTCATTGAAGAGATTGTGAACCACATCTTTGAGATAATCAGAAGGGACCCTCTTGATGTTGCCGAATATCTAGTTGGTTTAAATTCTCGTATGCAAAAAATAAATGATCTACTGCAAATTGGGTTAAATGATGAGGTCATCATGATAGGAGTTTATGGAAATGGGGGAACGGGTAAAACAACAATCACACGTGCTGTGTATAATGCAATTGCTGATAATTTTGATCACTTGTGCTTTCTTGGAGATATCAAAGGGGGATCTGGAAAACATGGCCTAGAACAACAGCAAGCCAGAATGCTTTCAAAAATTTTAGGGCGGAAGATAGAAATTGAAGACATTGATGAAGGAGTTGAACTCATAAAACGAGCACTCAGAGATAAGAAAATTCTGTTGATTCTTGATAATGTAGATGAACGAATACAGTTACGAAAGTTAGCTGGGGCATGTGAATGGTTTGGTCGGGGGAGCAGGATCATTATAACAACAAGAGATTTACATTTACTTAAGAGTCATGGGATTGAAAGAAGATATGAAATGGAGGGATTAAATCATGAAGAGTCTCTTGAATTGTTAAGTTGGAATGCCTTTGGGAAGATGCAAGTTGATGATCCAAGGTACACAGAAGTTGTGAATGAGGTGATAAGTTATGCCAGTGGTCTTCCCTTGGCCCTTGAAATATTGGGCTCTGATTTGTATGGTAAGAATGTAAGTGAGTGGAAATCTATGTTGGATGGATGTAAAAGCATCCCTCATGGTAAGATTCAACAAATATTAGAAGTAAGCTATAAAAGCTTACAACAACTTGAAAAAGAAGCTTTTCTTGATATTGCTTGCTTCTACAAAGGTCGTGAATTGGAATATGTCAAAAAGATGGTGGCAATTGCTCATGATTTTGACCCAGATTATCATATTGGAGTGTTGGAAGACAAATGCCTTATAAAGATTTATGGGGCCTGTATTGGAATGCACGATCTAGTACAAGATATGGGGAGAGACATCGTTCGTCTACAATCACCAAAAGATCCAGGAAAACGCAGTAGGCTATGGTCAAATAAAGATATCTTGCGTGTTTTGGAGAGAAATGAGGGCACAGATGAAGTTATTATCATAATTCAACTTGAAAGGTCCGAATGCATAGAAGTAAAATGGAATGGAAGAGCCTTCAAGAGTATGAACAATCTCAAAATTCTTATTCTTGACGATACAAAATTTTCACAAGGTCCCAAATATCTTCCCAATAGTTTAGCAGTATTGAGATGGCCAGGATACCCTTCATCAAGTTTGCCACGTGGTTTTCGTGCAAAGGATCTTGTTGAATTCAATGTGAGAGATAGTTGTTTCAATTCAACGGAAATCAGTAAGATAACGCAGAATATGAAAATGAGTGTTTTGAACTTTGAAGGGTGCGAGTATATCATTCACATACCTGATTTATCAGGCCTCTCAAGTTTAAAGGAGTTACGGCTTCGTAATTGCAAAAATCTGATTGAAATTGATAATTCGGTTGGGCAATTAGCAAAACTTGGAACTTTGGATGTACGTAACTGTGCGCAGCTTACGACTTTTCCAAGTGCATTGAATACACCCTCTCTTTATTATCTGAATATGAAGATGTGCTCAAGTTTGAATTGCTTTCCAGAAATAGCAACTCGTGAAATGAAAATAGAAGTGTTGAATTTGGTTGGAACTGGTATAAATCAATTGCCTCCATCAGTTGAAAATCTTACTCAACTTGTAGAGATAACACATGTTAGAGATGACACTACGGGCAAGGGAATTAGGTCAATGAAGCTACCAAGTAGCACTTTTTTGTTGCCAGAACTTGAGAAGATAGATGTTGAAGGATGCGAAGAGTTGCTTATGGAAGTGGAGTCAATGATATGTCCAAACATAGGACATCTTGAACTACAAAGATGTAATATATCCAATGAGAGCCTTCAAATTTATCTTACTTCATTCCCCAATCTTTGGTTTTTGGACTTGAGCGGCAATGATTTCACAATTTTGCCCGCATGCATAGAACATTGTCAAAATTTGGGAATAATTAAGCTCCGTCAATGCAAGCATCTAATAGAAGTGGAAAAGGTTCCGCCTAGCATAACATATTTGATGGCAGAAGATTGTGTATCAATGAGTTCAGAGTCCAAAAAGTTATTATTGAGTAAGGAGTTACTTGCATCTGTAGTGCCCATCAACATTAAAGTTGAAGGTTTGTATGGCTACCCTTCTGCAGACTATTTTTGTGTGCCAGGGGGAAGCATCCCGGAATGGTTCGATCACTGTAACAAAGGACGGTCCATTTCTTTTTGGTTTCGTGACCACCAACTCCCATCTCTCTGTGTTTGTGCTATTGCTCAACAAATGGAGTATCATGAATCGATCCTAACAAAAGTGTTCATAAATGATGAAATGGCGTATGGATATCACCTGCCGCTACCGACTGCGGGATATGATGTGGATCATATAATTATGCATTATATATGGAATGTCGATGTGGATAAAGAAATTAAAGAAAATCAATGGAATCATGTAAAGATTTGTCCGCTTTCAGGGCTTGGAGATGCCGTAAAAGAGAGCGGAATTTATGTTCTTAGAGATGAATGGACCAATATGAAAAATGTTCGATTCTCCGATCCTTTCCAAAGTCTGGATTTTTCAAGGAGTGGCCGAGGATGTGCTACAGAAGGTGACATTGCTGCAAATAACTCCTTCTTCCCTTCCCAAAGTGAGCAGCAACATACACACTCACATACTGTTAGGGACATTGACTCGTTAAGAATACTATCTGTACAGTGTAGGAGAATTATATTTCCCATCACAATTCATAAGTATAGTGGGATGATGGGTTCTCAATTAGGATATGATTTCTATATTACTAAGCAAGATTATTTATATATTACTGAGCAAGATGTCATGAAATTCCTAAGCATGCAAGAGCTGTCCATAACCATTATCCAACTCTTTGTGAGGTTTTGCTGCGAACTTTGCTTCTTTAGAGGAATTGTGGATAGATTTGGATTTTTGTGTCCAAATGCTATTCAAGGTGTAGGGCATACACGAGAAGACAAGATATCTTACATAGGAAGTACTATCAAGGAAGGCAATAATCAATGTTGGCTTGCACCAATTCGTGAAGGGAACCATTGGACATTATGTGCTGTTTGCCCAGGCTCGAATATCATTCATTGGTTTGATTCACTCGGAGGCAAACAAAGCGATGATATTGAGAAAGTATTCACCGAAGCCCTTGTGACGTACCAAATCACTGGAGGAGAGAACATAAAATGGCTATACCCAAAGTATCGTCGTCAACTTGAAGATAAAGAAGGTGGATATTACATCATGAGATATATGTATGACATCATCGATCTTAACGAAGTTGACTCATTAGACATGGTGGTCAGCCTATTTTTTGGCGTCTCCGTGGCCGCGGCGGTGGCCGCAGCGGTGGCGGTGGCCGTGGTGGCAGTAGTGGCGGTGACAGATGTTAAATAA 4002 0.3876 MTRRPKISSIHYQWTYDVFLNFRGENTRHGFIGTLNKELNQKGVRTFFDDQEIGIGEEITPTLLRAIQESRMAITVFSEEYASSTFCLKELVQIHQCIKENGRLVWPVFYDVEPSVVRHQRGKYGEALVTHQQNSKADEEEVESWKRALREVANLKGSSYDPRKDYEHKLIEEIVNHIFEIIRRDPLDVAEYLVGLNSRMQKINDLLQIGLNDEVIMIGVYGNGGTGKTTITRAVYNAIADNFDHLCFLGDIKGGSGKHGLEQQQARMLSKILGRKIEIEDIDEGVELIKRALRDKKILLILDNVDERIQLRKLAGACEWFGRGSRIIITTRDLHLLKSHGIERRYEMEGLNHEESLELLSWNAFGKMQVDDPRYTEVVNEVISYASGLPLALEILGSDLYGKNVSEWKSMLDGCKSIPHGKIQQILEVSYKSLQQLEKEAFLDIACFYKGRELEYVKKMVAIAHDFDPDYHIGVLEDKCLIKIYGACIGMHDLVQDMGRDIVRLQSPKDPGKRSRLWSNKDILRVLERNEGTDEVIIIIQLERSECIEVKWNGRAFKSMNNLKILILDDTKFSQGPKYLPNSLAVLRWPGYPSSSLPRGFRAKDLVEFNVRDSCFNSTEISKITQNMKMSVLNFEGCEYIIHIPDLSGLSSLKELRLRNCKNLIEIDNSVGQLAKLGTLDVRNCAQLTTFPSALNTPSLYYLNMKMCSSLNCFPEIATREMKIEVLNLVGTGINQLPPSVENLTQLVEITHVRDDTTGKGIRSMKLPSSTFLLPELEKIDVEGCEELLMEVESMICPNIGHLELQRCNISNESLQIYLTSFPNLWFLDLSGNDFTILPACIEHCQNLGIIKLRQCKHLIEVEKVPPSITYLMAEDCVSMSSESKKLLLSKELLASVVPINIKVEGLYGYPSADYFCVPGGSIPEWFDHCNKGRSISFWFRDHQLPSLCVCAIAQQMEYHESILTKVFINDEMAYGYHLPLPTAGYDVDHIIMHYIWNVDVDKEIKENQWNHVKICPLSGLGDAVKESGIYVLRDEWTNMKNVRFSDPFQSLDFSRSGRGCATEGDIAANNSFFPSQSEQQHTHSHTVRDIDSLRILSVQCRRIIFPITIHKYSGMMGSQLGYDFYITKQDYLYITEQDVMKFLSMQELSITIIQLFVRFCCELCFFRGIVDRFGFLCPNAIQGVGHTREDKISYIGSTIKEGNNQCWLAPIREGNHWTLCAVCPGSNIIHWFDSLGGKQSDDIEKVFTEALVTYQITGGENIKWLYPKYRRQLEDKEGGYYIMRYMYDIIDLNEVDSLDMVVSLFFGVSVAAAVAAAVAVAVVAVVAVTDVK 1333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00029 1333 Gene3D - 10 186 IPR035897 -
Pral5079g00029 1333 Gene3D Ribonuclease Inhibitor 724 908 IPR032675 -
Pral5079g00029 1333 SMART till_3 15 155 IPR000157 GO:0007165
Pral5079g00029 1333 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 718 IPR044974 GO:0006952
Pral5079g00029 1333 Pfam TIR domain 16 179 IPR000157 GO:0007165
Pral5079g00029 1333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 445 IPR027417 -
Pral5079g00029 1333 SUPERFAMILY L domain-like 542 890 - -
Pral5079g00029 1333 PRINTS Disease resistance protein signature 217 232 - -
Pral5079g00029 1333 PRINTS Disease resistance protein signature 648 664 - -
Pral5079g00029 1333 PRINTS Disease resistance protein signature 386 400 - -
Pral5079g00029 1333 PRINTS Disease resistance protein signature 292 306 - -
Pral5079g00029 1333 SUPERFAMILY Cysteine proteinases 1114 1290 IPR038765 -
Pral5079g00029 1333 Gene3D - 187 343 IPR027417 -
Pral5079g00029 1333 SUPERFAMILY "Winged helix" DNA-binding domain 422 528 IPR036390 -
Pral5079g00029 1333 Gene3D Adenoviral Proteinase; Chain A 1116 1304 - -
Pral5079g00029 1333 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral5079g00029 1333 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 157 IPR035897 -
Pral5079g00029 1333 Pfam NB-ARC domain 200 436 IPR002182 GO:0043531
Pral5079g00029 1333 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral5079g00029 1333 Gene3D - 350 435 IPR042197 -
Pral5079g00029 1333 Gene3D Ribonuclease Inhibitor 552 723 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00029 Pral-Chr5079 448672 456002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00029 5 887 WRKY Transcription Factor Family AT4G12020 27.594 2.68e-68 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00029 - - pcin:129312441 985.326