Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00026 ATGGCCATTACTGTATTTTCTAAGGAGTATGCTTCCTCAACATTTTGCCTAAATGAACTAGTCCAAATCCATCAATGTATCAAGAAAAACGGTCGACTGGTTTGGCCAATCTTTTATGATGTGGAGCCTTCTGAAGTACGACATCAAAGAGGAAAATATGGACAAGCACTAGTTACACATCGACAAAACTCAAGGGCTGATGAAGAAAAAATGAAAAGTTGGAAGCATGCACTACATGAAATAGCTGATCTTAAAGGTTCATCATGTGATCCAAGGAAAAATTTTGAGCATGAACTCATTGAAAAGATTGTGAACGATATCTGTAGGACAATCAAAAGGGTCCCTCTCTATGTTGCCGAATATCCAGTTGGTTTGAATTCTCGTGTTCAAAAAATAAACTCTCTATTGCACCTTGAGTTAAATGATAAGGTCATCATGATAGGAATTTATGGAACTGGGGGAATGGGCAAGACAACAATCACACGTGCAGTGTATAATACAATTGCTGATAATTTTGATTATTTGTGCTTTCTTGATGATATCAAAGGAAAATCTGGAAAATATGGCCTAGAACAAGAGCAAGCCAGGATGCTTTCAAAGCTCTTAGGAGAGAAGATAGAAATTGAAGAGATTAATGAAGGAGTTAAGCTCATAAAGCGAATGCTCAAAGATAAGAAAGTTCTTTTGATTCTTGATAATGTAGATGAACGAATGCAGTTACGAAAGTTAGCCGGGGCATGTGAATGGTTTGGTTGGGGGAGCAGGATCATTATAACAACACGAGATTTACATTTACTCAAGAGTCATGGGGTTGAAAGAAGATATGAAATGGAGGGATTAAATCATGAAGAGTCTCTTGAATTGTTAAGTTGGAATGCCTTTGGGAAGATGCAAGTTGATGATCCAAGGTACACAGAAGTTGTGAATGAGGTGATAAGTTATTCCAGTGGTCTTCCCTTGGCCCTTGAAATATTAAGCCGTGATTTGTATGTTAAGAATGTAAATGAGTGGAAATCTATGTTGGATGGATGTAAAAGAATCCCTCATGGTAAGATTCAACAAATATTAGAAGTAAGCTATGGAGGCTTACAACAATTTGAAAAAGAAGTTTTTCTTGATATTGCTTGCTTCTACAATGGTAGTGAATTGGAATATGTCAAAAAGATGGTGGCAATTGCTCATGATGTTGACCCAGATTATCATATTGGAGTGTTGGTAGAGAAATGCCTTGTAAAGGTTTATTGGGGCCATCTTATTGGAATGCACGATCTAGTACAGGATATGGGGAGAGACATCGTTCGTCTACAATCACCAAAAGATCCAAGAAAACGCAGTAGGCTATGGTCAAATAAAGATATCTTGCGTGTTTTGGAGAGAAATGAGATAACGCAGAATATGAAAATGAGTGTTTTGAACTTTGAAGGGTGCGAGTATATCATTCACATACCTGATTTATCAGGCCTCTCGAGTTTAAAGGAGTTACGGCTTCGTAATTGCGAAAATTTGATTGAAATTGATAATTCGGTTGGGCAATTAGCAAAACTTGAAACTTTGAATGTACGTAACTGTGCCCAGCTTATGACTTTTCCAAGTGAATTGAATACACCCTCTCTTTATGATCTAGATCTGGAGATGTGCTCAAGTTTGAATTACTTTCCAGAAATAGCAACTCGTGAAATGAAAATAGAAGAGTTGAACTTGGTTGGAACTGGTATAAATCAATTGCCTCCATCAGTTGAAAATCTTACTCAACTTCGAAGCATAAAACATATTGGAAATGACACTGCGGGCAAGGGAATCAGGTTAGTGAAGCTACCAAGTAGCACTTTTTTGTTGCCAGAACTTGCAGGTATACATGTTGAAGGATGCGAAGAGTTGCTTATGGAAGTGGAGTCAATGATATGCCCAAACGAGTTACTTGCATCTGTAGTGCCCATCAACATTAAACCTGAACATTTTCTTGGCTCGGCTCCTAGCTACTATTTTTGTGTGCCAGGGGGAAGAATCCCAGAATGGTTCGATCACTGTAACAAAGGACGGTCCATTTCTTTTTGGTTTCGTGACCACCACCCCCCATCTCTCTGGGTTTGTGCTATTGCTCAACAAATAGAGGATCATGAATCGATCCGAACAAAAGTGTTCACAAATGGTGAATTGCCATGTCCACCGATGCGAACAAAAGTGTTCATAAATAATAAAATGGCATATGAATGTTACCTGCAGCTACCGATTACGGGATATGATGTGGATCATATAATTATGCATTATATATGGAATTTCCAAATGGATGGAGAAATTAAAGAAAATCAATGGAATCATGTAAAGATTTGTCCGCTTTTAGAGCTTGGAGATGCCATAAAAGAGAGCGGAATTTATGTACTCAGAGATGAATGGACCAATATGAAAAATATCCGATTCACTGATCCTTTCCAAAGTTTGGGTTTTTTGGGGAGTGACCGAGGATGTGCTATAGAAGGTGACACTGCTACAAATAACCCTCTCTTCCCTTCCCAAAGTGAGCAGCAACATACACAATCACATACTGCTAGGGACATTGACTCGTTAAGAATGCTATCTGTAAAGTGTAGGAGAATTATATTTCCTATCACAATTCATACGGATAGTGGCATGATGGGTTCTCAATTAGAATATGATTTCTATATTACTGAGCAAGATGTCAGGAAATTCCTAAGCATGCAAGAGCTGTCCATAACCATTATCCAACTCTTTGTGAGGTTTTGCTACGAACTTTGCTCCTTTAGAGGAATTGTTGATAGATTTGGATTTTTGTGTCCAAATGCTATTCAAGGTGTAGGGCATACACGAGAAGATAAGATATCTTACATAGGAAGTACCATCAAGGAAGGCAATAAGCAATGTTGGCTTGCACCAATTTGTGAAGGGAACCATTGGACATTATGTGCTATTTGCCCAGGCTCGAATATCATTCATTGGTTTGATTCACGTGGAGGCAAACAAAGCGATGATATTGAGAACGTATTGACTGAGTAA 3012 0.3831 MAITVFSKEYASSTFCLNELVQIHQCIKKNGRLVWPIFYDVEPSEVRHQRGKYGQALVTHRQNSRADEEKMKSWKHALHEIADLKGSSCDPRKNFEHELIEKIVNDICRTIKRVPLYVAEYPVGLNSRVQKINSLLHLELNDKVIMIGIYGTGGMGKTTITRAVYNTIADNFDYLCFLDDIKGKSGKYGLEQEQARMLSKLLGEKIEIEEINEGVKLIKRMLKDKKVLLILDNVDERMQLRKLAGACEWFGWGSRIIITTRDLHLLKSHGVERRYEMEGLNHEESLELLSWNAFGKMQVDDPRYTEVVNEVISYSSGLPLALEILSRDLYVKNVNEWKSMLDGCKRIPHGKIQQILEVSYGGLQQFEKEVFLDIACFYNGSELEYVKKMVAIAHDVDPDYHIGVLVEKCLVKVYWGHLIGMHDLVQDMGRDIVRLQSPKDPRKRSRLWSNKDILRVLERNEITQNMKMSVLNFEGCEYIIHIPDLSGLSSLKELRLRNCENLIEIDNSVGQLAKLETLNVRNCAQLMTFPSELNTPSLYDLDLEMCSSLNYFPEIATREMKIEELNLVGTGINQLPPSVENLTQLRSIKHIGNDTAGKGIRLVKLPSSTFLLPELAGIHVEGCEELLMEVESMICPNELLASVVPINIKPEHFLGSAPSYYFCVPGGRIPEWFDHCNKGRSISFWFRDHHPPSLWVCAIAQQIEDHESIRTKVFTNGELPCPPMRTKVFINNKMAYECYLQLPITGYDVDHIIMHYIWNFQMDGEIKENQWNHVKICPLLELGDAIKESGIYVLRDEWTNMKNIRFTDPFQSLGFLGSDRGCAIEGDTATNNPLFPSQSEQQHTQSHTARDIDSLRMLSVKCRRIIFPITIHTDSGMMGSQLEYDFYITEQDVRKFLSMQELSITIIQLFVRFCYELCSFRGIVDRFGFLCPNAIQGVGHTREDKISYIGSTIKEGNKQCWLAPICEGNHWTLCAICPGSNIIHWFDSRGGKQSDDIENVLTE 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00026 1003 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 629 IPR044974 GO:0006952
Pral5079g00026 1003 SUPERFAMILY Cysteine proteinases 884 1001 IPR038765 -
Pral5079g00026 1003 Gene3D - 279 364 IPR042197 -
Pral5079g00026 1003 ProSiteProfiles TIR domain profile. 1 111 IPR000157 GO:0007165
Pral5079g00026 1003 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 86 IPR035897 -
Pral5079g00026 1003 SUPERFAMILY L domain-like 466 634 - -
Pral5079g00026 1003 Pfam TIR domain 2 109 IPR000157 GO:0007165
Pral5079g00026 1003 SUPERFAMILY "Winged helix" DNA-binding domain 351 458 IPR036390 -
Pral5079g00026 1003 Pfam NB-ARC domain 129 347 IPR002182 GO:0043531
Pral5079g00026 1003 PRINTS Disease resistance protein signature 221 235 - -
Pral5079g00026 1003 PRINTS Disease resistance protein signature 486 502 - -
Pral5079g00026 1003 PRINTS Disease resistance protein signature 146 161 - -
Pral5079g00026 1003 PRINTS Disease resistance protein signature 315 329 - -
Pral5079g00026 1003 Gene3D Adenoviral Proteinase; Chain A 875 1002 - -
Pral5079g00026 1003 Gene3D Ribonuclease Inhibitor 440 626 IPR032675 -
Pral5079g00026 1003 Gene3D - 1 106 IPR035897 -
Pral5079g00026 1003 Gene3D - 107 272 IPR027417 -
Pral5079g00026 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 374 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00026 Pral-Chr5079 375638 381810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00026 123 579 WRKY Transcription Factor Family AT5G45050 29.091 4.73e-44 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00026 - - pcin:129312441 576.244