Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00021 ATGGAAGTTGATGATCCAAAATACATGGATGTTGCGAATCAGGTGATAAGTTATGCCAGTGGCCTTCCTTTAGCCCTTGAATTAATAGGCTCTGATTTGTATGGTAAGAATGCAAGTGAGTGGGAATCTATGCTAGATGGATGTAAAAGAATCCCTCATGATCAGATTCAACAAATATTAAAAGTAAGTTATGATGGGTTAAAACAACTTGAAAAAGATGTTTTTCTTGACATTGCTTGCTTTTACAAAGGGAGTGGATTGGAATATGTCAAAAAGATGATAGCAACTGTTCATGATTTTGATCCATACTATCATATTGGAGTGTTGGTAGACAAATGCCTCATAAAGATTGATAGCACCAATTGTATTACAGTTGATTGTATTGAAATGCATGAACTAGTGCAAGATATGGGGAGAGAGATAGTTCGTCTGGAATGA 438 0.3562 MEVDDPKYMDVANQVISYASGLPLALELIGSDLYGKNASEWESMLDGCKRIPHDQIQQILKVSYDGLKQLEKDVFLDIACFYKGSGLEYVKKMIATVHDFDPYYHIGVLVDKCLIKIDSTNCITVDCIEMHELVQDMGREIVRLE 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00021 145 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 143 IPR044974 GO:0006952
Pral5079g00021 145 SUPERFAMILY "Winged helix" DNA-binding domain 54 143 IPR036390 -
Pral5079g00021 145 Gene3D - 1 68 IPR042197 -
Pral5079g00021 145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 78 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00021 Pral-Chr5079 249524 249961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00021 10 145 WRKY Transcription Factor Family AT5G45050 39.416 5.43e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00021 - - pcin:129312772 165.236