Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00019 ATGCAAGTTGATGATCCAAGATATCGGGAAGTTGTGAATCAAGTGATAAGTTATGTCAACGGTCTTCCCTTAGCCCTTGAATTAATAGGCGCTGACTTGTATGGTAAGAAGTTAAGGGAGTGGGAATCTATGTTAGATGGATGTAAAAGAATCCCTCATGATAAGATTCAGCAAATATTAAGAGTAAGCTACGACGGCTTACAACAACTTGAAAAAGAAGTTTTTCTTGATATTGCTTGCTTCTACCAAGGGAGTGAATTGGAATTTGTCAAAAAGATGGTGGCAAGTGTTCATGATTTTGATCCAGATTATCATATTGCAGTGTTGATAATGCGGAATACCAATGTGACTGTTTTGAACTTCGAAGGGTGCCAGTATATTAGGCACATGCCTGATTTATCTGGCCTCTCAAGTTTAAAGGAGTTACAGCTTCGTGATTGCAAAAACTTGATAGAAATTGATAATTCGGTTGGACAATTAGCCAAACTTGAAACCTTAGATGTATGTGACTGTGTCCAACTTATGACTTTTCCAAGTGAAATGAATACACCATCTCTCCACTGGTTGGATCTCGTGAATTGCTCGAATCTGAAATACTTCCCAGAAATAATGACCAGGGAAATGGAAATACCACAGTTGTCTTTGTTTGGAACTGGCATAGATCAGTTGCCTCCATCAGTTGAAAATCCTACTCAACTTAGTACGATACAGATCAGAAATGACGCTGTGGGCAAGGGAATCAGGTCATTAAAGCTACCAAGTAGCACTTTTTTGTTGCCAAAACTGGGACTTATAGATGTTCAAGGATATGAAGAGTTGCTTATGGAAGTGGAGTCAATAATATGTCCAAACATAAGTTGTCTCGGGCTAACAAGATGTAATATATCCAATGAGAACCTTCAGATTTATCTTTCTTCATTCTCCAATGTTCAGATTTTGGACTTGACAGGTAGTAATTTCACAATTTTGCCCGCATGCATAGAAGATTGTCAAAATTTGATTCAACTTAAGCTAGATGAATGCCAGCATCTAATAGAAGTGGAAAAGGTTCCGCCTAGCATAAAACAGTTGACGGCAGCAGCTTGTGTGTCATTGAGTTTAGAGTCCAAAAAGTTATTGTTGAGTAAGGAATTACTTGCGTCTGTAATACCCATCAACTATCAACTTCTTTCTAAGGTCTTTCGAGCACATCTTTGTGTGCCAGGAGGAAGCATCCCAGAATGGTTCGATCACTATAGCAAAGGACCGTCCATTTCTTTTTGGTTTCGTGACCACTTCCCATCTCTTTGTATTTGTGCTATTGTTCAACCAATGGGAAATAATTGTTGGGTCCAAACAGAAGTGTTCAAAAATGACGAAGTGGCATATAAGTGTAACTTGTGGCAAATGACTAGAGGATATGATGTGGAGCATATAATTATGCACTATATGTGGAATTTCGGAATAAATGAAGAATTTGACGAACATCAATGGAACCATGTAAAGATTTGTTCACAATCAGAGTACGGAGATGCTGTAAAAGAGAGAGGAATCTATGTAATCAGAGATGAATGGACTAATATGGAAAATATTCGATTCACTGATCCTTCCCAAAATTCAGATATTTTGCGGGATTGCCAAGGATGTGCTATTGAAGGCCACACTGCTACGAAAAACCCTTTCTTCCCTTCCCAAAATGAGCAACAACATACACACTCACATGTTATTAGGGACATTGACTCGAATGTGATTTCTATATTACGAACCAAAATGTCAAGGAACTCCTAA 1767 0.3831 MQVDDPRYREVVNQVISYVNGLPLALELIGADLYGKKLREWESMLDGCKRIPHDKIQQILRVSYDGLQQLEKEVFLDIACFYQGSELEFVKKMVASVHDFDPDYHIAVLIMRNTNVTVLNFEGCQYIRHMPDLSGLSSLKELQLRDCKNLIEIDNSVGQLAKLETLDVCDCVQLMTFPSEMNTPSLHWLDLVNCSNLKYFPEIMTREMEIPQLSLFGTGIDQLPPSVENPTQLSTIQIRNDAVGKGIRSLKLPSSTFLLPKLGLIDVQGYEELLMEVESIICPNISCLGLTRCNISNENLQIYLSSFSNVQILDLTGSNFTILPACIEDCQNLIQLKLDECQHLIEVEKVPPSIKQLTAAACVSLSLESKKLLLSKELLASVIPINYQLLSKVFRAHLCVPGGSIPEWFDHYSKGPSISFWFRDHFPSLCICAIVQPMGNNCWVQTEVFKNDEVAYKCNLWQMTRGYDVEHIIMHYMWNFGINEEFDEHQWNHVKICSQSEYGDAVKERGIYVIRDEWTNMENIRFTDPSQNSDILRDCQGCAIEGHTATKNPFFPSQNEQQHTHSHVIRDIDSNVISILRTKMSRNS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00019 588 PRINTS Disease resistance protein signature 19 33 - -
Pral5079g00019 588 PRINTS Disease resistance protein signature 134 150 - -
Pral5079g00019 588 Gene3D Ribonuclease Inhibitor 91 413 IPR032675 -
Pral5079g00019 588 Gene3D - 1 74 IPR042197 -
Pral5079g00019 588 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 110 IPR044974 GO:0006952
Pral5079g00019 588 SUPERFAMILY L domain-like 106 358 - -
Pral5079g00019 588 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 78 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00019 Pral-Chr5079 133336 138187 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00019 136 372 WRKY Transcription Factor Family AT5G45050 27.823 1.93e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00019 - - pcin:129302759 299.671