Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00006 ATGAGCAGTTTGAAGAACAACTCTGATCTGATAGACGCCAAGCTGGAGGAGCATCAGTTGTGTGGATCCAAGCAGTGTCCTGCTTGCGGACACAAGTTTCAATCCAAACCAGACTGGGTGGGTCTACCAGCAGGAGTTAAATTCGATCCCACGGACCAAGAACTCATTGAACACCTCGAAGCCAAAGTTGAATCCAAGCACATGAAATCTCACCCTCTCATCGATGAGTTCATTCCCACCATCGAAGGAGAAGATGGAATTTGCTATACCCATCCCGACAAACTCCCAGGAGTAACGAGGGATGGGTTGAGCAGGCACTTTTTTCACAGGCCATCGAAGGCATATACGACAGGGACGAGAAAGAGAAGGAAAATCCAGAACGAGAGTGACTTACAAGGAGGAGAAACCAGATGGCACAAGACCGGAAAAACCAGACCAGTTCTTGTGAATGGCAAGCAAAAAGGTTGTAAGAAAATCCTCGTACTGTACACCAACTTTGGCAAGAACAGAAAGCCTGAGAAGACCAATTGGGTTATGCATCAGTACCATTTGGGGCAACATGAAGAAGAGAAAGAAGGCGAACTTGTCGTCTCCAAAATATTCTTTCAGACACAGCCCAGACAATGCAACACCACCAACAACAATATTGTTAATGCAAATATTAATAATAATAATAACTGGTCGGAGAGAAGCGCGACGACCGGCGAAGCGAGCGGAGAGCCGAACAGTAATAGTAGAAGAGAAAGCACAAGTGGGAGTTGTTCTTCAAAAGAAATAGTCACTACTCATCACTCTCATAGAGATCATGACGTCTCTACTGTTGCTGTTCCTCCATTAACGTCCTTCACTGCTTTGGATATTCATCATCAACACCTCAAATCTGACCATTTCAGCTTCATCCCATTCAGAAAAAGCTTCGACGAGGTGGGAATTGGAGATGCTTCAAGAGGAAGAGAAGTGGTGCAAGCTTCAGGTTCATCAGCAGAAGTAGGGAATTATCATCATCATCATCTTCAACAACAACAAGAACAACATCAGATTACTGCAAATTCAGCATTTCATATCAGTAGGCCTTCACATCCTATTTCTTCCATCATCTCTCCACCTCCTCCTCCACATCACACCTCCATCATCCTTGATGATGTCACCAGATTAATGCTCCAAAACGATCATTTCCAGCAACAACATCATAAACCGGAAGGAAGGTCTGCGTCTGGCTTGGAGGAACTCATTATGGGATGCACTTCAACTAATTCTAAAGAGGAGTCATCTATTTCACATTATCAACAAGAAGCAGAATGGTTGAAGTACTCTTCATGTTCATACTGGCCTGATTCTGATAATCCAGGTCATCCTCATCATCATGGTTAG 1371 0.4406 MSSLKNNSDLIDAKLEEHQLCGSKQCPACGHKFQSKPDWVGLPAGVKFDPTDQELIEHLEAKVESKHMKSHPLIDEFIPTIEGEDGICYTHPDKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNESDLQGGETRWHKTGKTRPVLVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFFQTQPRQCNTTNNNIVNANINNNNNWSERSATTGEASGEPNSNSRRESTSGSCSSKEIVTTHHSHRDHDVSTVAVPPLTSFTALDIHHQHLKSDHFSFIPFRKSFDEVGIGDASRGREVVQASGSSAEVGNYHHHHLQQQQEQHQITANSAFHISRPSHPISSIISPPPPPHHTSIILDDVTRLMLQNDHFQQQHHKPEGRSASGLEELIMGCTSTNSKEESSISHYQQEAEWLKYSSCSYWPDSDNPGHPHHHG 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00006 456 MobiDBLite consensus disorder prediction 124 143 - -
Pral5079g00006 456 Pfam No apical meristem (NAM) protein 43 184 IPR003441 GO:0003677|GO:0006355
Pral5079g00006 456 Gene3D NAC domain 51 207 IPR036093 GO:0003677|GO:0006355
Pral5079g00006 456 SUPERFAMILY NAC domain 37 203 IPR036093 GO:0003677|GO:0006355
Pral5079g00006 456 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 6 352 IPR044799 GO:0003700
Pral5079g00006 456 MobiDBLite consensus disorder prediction 220 259 - -
Pral5079g00006 456 MobiDBLite consensus disorder prediction 220 270 - -
Pral5079g00006 456 FunFam NAC domain-containing protein 73 51 207 - -
Pral5079g00006 456 MobiDBLite consensus disorder prediction 124 142 - -
Pral5079g00006 456 ProSiteProfiles NAC domain profile. 42 203 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00006 Pral-Chr5079 81283 85226 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00006 4 448 NAC Transcription Factor Family AT5G56620 50.855 4.89e-131 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5079g00006 NAM 5.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00006 - - gmx:100791884 646.351