Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5079g00004 ATGAAGATCGAGCAATTGGACGATGTGGATTCGGATGGCTGTCGGAGCAAAGGGAATTACGAGAGGCAGATTGTGAGTGTTGATGCAAAGAGGGCGTTGGTTGGAGCAGGTGCCCGGATCTTGTTTTACCCGACACTTTTGTATAATGTGCTTCGAAACAAGATTGAAGCAGAGTTCCGGTGGTGGGATGAAGTCGATGAGTTTCTATTATTGGGAGCGGTTCCATTCCCCAAAGACGTTCCCCGCTTGAAGAAGCTTGGTGTGGGTGCTGTAATTACTCTAAACGAACCTTATGAAACCTTGGTTCCTTCATCTTTATATCTTGCACATGGGATCGATCATTTGGTTATCCCTACAAGGGATTATCTCTTTGCCCCTTCATTTGTTGATATATCTCGAGCTGTGCAATTCATTCATCAGAATGCAACATGCGGCAAGACTACTTATGTTCACTGTAAAGCTGGGCGGGGCAGGAGTACAACAATTGTCCTATGCTATTTGATTGAATACAAGCTTATGACACCTCTTGCTGCCCTGGAATATGTACGGTCAAGAAGACCTAGAGTTCTATTAGCACCCTCACAGTGGAAGGCTGTTCAGAATTATAGCAAGCGCAGACCTTGTCCTAGGCCACACTCTCCCCCAGGTGATGCAGTTCTTATAACCAAAGCTGATCTTGAGGGTTACCACAATACATTCGATGCTCGTATGGAGCTGGCCATTGTTCCCAAAGGGCCAAAGACAAAGTCTAAGCCCATGATATCGAAGCTATCTTGCCTGTTTGCATCATTAAAAGTTTCTGGTTATGGCATACCAGTGACCCGGCGGCTGCCTGTGTCTGAGGCACGTGCTTGCTAA 858 0.4627 MKIEQLDDVDSDGCRSKGNYERQIVSVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDEVDEFLLLGAVPFPKDVPRLKKLGVGAVITLNEPYETLVPSSLYLAHGIDHLVIPTRDYLFAPSFVDISRAVQFIHQNATCGKTTYVHCKAGRGRSTTIVLCYLIEYKLMTPLAALEYVRSRRPRVLLAPSQWKAVQNYSKRRPCPRPHSPPGDAVLITKADLEGYHNTFDARMELAIVPKGPKTKSKPMISKLSCLFASLKVSGYGIPVTRRLPVSEARAC 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5079g00004 285 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 129 197 IPR000387 GO:0016311|GO:0016791
Pral5079g00004 285 SMART dsp_5 64 205 IPR020422 GO:0006470|GO:0008138
Pral5079g00004 285 ProSiteProfiles Dual specificity protein phosphatase domain profile. 61 208 IPR020422 GO:0006470|GO:0008138
Pral5079g00004 285 FunFam Dual specificity phosphatase domain protein 61 208 - -
Pral5079g00004 285 Pfam Dual specificity phosphatase, catalytic domain 81 204 IPR000340 GO:0008138|GO:0016311
Pral5079g00004 285 Gene3D Protein tyrosine phosphatase superfamily 61 206 IPR029021 -
Pral5079g00004 285 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 55 204 IPR029021 -
Pral5079g00004 285 ProSitePatterns Tyrosine specific protein phosphatases active site. 150 160 IPR016130 GO:0016311|GO:0016791
Pral5079g00004 285 CDD PTPMT1 61 205 IPR044596 GO:0004721
Pral5079g00004 285 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5079g00004 Pral-Chr5079 72897 76147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5079g00004 4 265 Protein tyrosine phosphatase (PTP) family AT2G35680 52.159 3.86e-98 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5079g00004 - - gmx:100817410 486.108