Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5074g00011 ATGGAGTTAATAAAAAGGAAGTTAACCGACAGAGAAATTCTACTTGTCCTTGATGATGTGAGTCATGTTAGCCAACTTGAGAAGTTGGCTCCAAGGCAAGGATGGTTCAGCAAAGGGAGCATAATAGTGATAACAACAAGGGATAAGCATTTGCTATCATCATATGGTGTATCTGATAGTGCTATATATCACATTGAATTCTTGAGTGATAGCGAGTCCCATGAACTTCTCATTCAAAATGCCTTTAAAGAAGGGCAACCTAATGAAGATTATTTGAACCTTGCTAGAACCGTCATTGAATATGCTGGAGGCCTTCCTTTAGCACTCGAAGTGTTAGGTTCATTTCTTTGCAAAAGAACGATAGAGGAATGGGAAGATGCACTAGCTAAGTTCGAGAAATGTCTTCCAGAGGACATTTCCAAGATACTTGAAGTGAGTCTTCACGGATTAGAGCTTAATGAGAAGACTATATTCTTGGATATTGCTTGCTTTTTCAATGGGATGGATGAAGATCATATCATACAAATTTTAGAAACATTGGATAAGGATCTTCACCCAAAAATTGGAATAAGGCTTCTTATTGACAAATCACTAGTAATTAATTATGAAGGGCATTTGCGGGTGCATGAAACTCTGCAAAATATGGCTAAACATGTTGTCTATCAAGAATCATCTGGTGATGCCAGCAAGCTTTCTAGGATATTGTCCTTGGATGATGCCAATCATGTATTAGGAGGAAATAAGGGAACAGAAGCAACCCGGGGAATAATGCTAACATTAGAAAAGTCATGTGATGCATTTTGGGATCCTGAAGCCTTCTCAAAACTGAGTAATCTCAAGTTACTTATCATTTCAAGTCACTCATATGTTTCACATTGCCAACTGAATCTTCCGCTTGGACTCAAGTCTCTTTCCAAAGAGTTGAAAATCATAGAATGGGAGGGGTATCCATTATTTTATTTGCCAAGTCAACCTCAACTCAATCAACTTGTTGTGCTAAAAATGCGACATAGCAAGTTAAAAGAACTATGGAGAGGAAAACAGTCTCTTCGAAGCTTGAAGTCCATTAATCTATCTCATTCAGAATACCTCATCAAAACCCCAAATTTTGATGGAATTCCTCATCTTGAAAAGTTGATTCTTCAAGGGTGTTCTAACTTGGTTGAAATTCACCAGTCTCTTGGGCAACACAAGAAACTTGTCACTGTTGACTTGAAAGATTGCAAAGAAGTTAAAACGCTTCCAGAAAAATTTGAGATGAATAGCTTGGAGACTTTTATTCTATCAGGTTGTTCAAAAGTTAGAAAACTTCCTGAGTTTGGAAAAGATATGGCATGTCTATCGAAGCTTGATTTAGAGAAGACTGCTCTAGCCAAGCTACCTCAATCACTGGGCAATTTGATTGGTCTCGTTGAATTAAATTTGACAAACTGCAAAAAGCTGGTCTGTCTTCCATGTAGTGTTAGTAAGTTGAAAGCTCTCAAAATTATCAAACTTTCTAATGCTCAAAGCTTTCAAGCCTGCCAGAGAATTTGA 1536 0.3757 MELIKRKLTDREILLVLDDVSHVSQLEKLAPRQGWFSKGSIIVITTRDKHLLSSYGVSDSAIYHIEFLSDSESHELLIQNAFKEGQPNEDYLNLARTVIEYAGGLPLALEVLGSFLCKRTIEEWEDALAKFEKCLPEDISKILEVSLHGLELNEKTIFLDIACFFNGMDEDHIIQILETLDKDLHPKIGIRLLIDKSLVINYEGHLRVHETLQNMAKHVVYQESSGDASKLSRILSLDDANHVLGGNKGTEATRGIMLTLEKSCDAFWDPEAFSKLSNLKLLIISSHSYVSHCQLNLPLGLKSLSKELKIIEWEGYPLFYLPSQPQLNQLVVLKMRHSKLKELWRGKQSLRSLKSINLSHSEYLIKTPNFDGIPHLEKLILQGCSNLVEIHQSLGQHKKLVTVDLKDCKEVKTLPEKFEMNSLETFILSGCSKVRKLPEFGKDMACLSKLDLEKTALAKLPQSLGNLIGLVELNLTNCKKLVCLPCSVSKLKALKIIKLSNAQSFQACQRI 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5074g00011 511 Pfam Leucine Rich Repeat 330 348 IPR011713 -
Pral5074g00011 511 Gene3D - 1 62 IPR027417 -
Pral5074g00011 511 Gene3D Ribonuclease Inhibitor 419 509 IPR032675 -
Pral5074g00011 511 Gene3D Ribonuclease Inhibitor 262 418 IPR032675 -
Pral5074g00011 511 Pfam NB-ARC domain 4 142 IPR002182 GO:0043531
Pral5074g00011 511 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 487 IPR044974 GO:0006952
Pral5074g00011 511 Gene3D - 67 151 IPR042197 -
Pral5074g00011 511 PRINTS Disease resistance protein signature 102 116 - -
Pral5074g00011 511 PRINTS Disease resistance protein signature 348 364 - -
Pral5074g00011 511 PRINTS Disease resistance protein signature 7 21 - -
Pral5074g00011 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 161 IPR027417 -
Pral5074g00011 511 SUPERFAMILY L domain-like 254 502 - -
Pral5074g00011 511 SUPERFAMILY "Winged helix" DNA-binding domain 138 242 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5074g00011 Pral-Chr5074 283111 284854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5074g00011 3 506 WRKY Transcription Factor Family AT4G12020 31.907 2.71e-64 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5074g00011 - - pcin:129318967 628.246