Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5074g00010 ATGGGGTTAATAAAGAGAAAGTTGACTGACAAAAAAATTCTACTTGTCCTTGATGATGTGAGTGATATTAGGCAACTTGAAAATTTGGCTCCAAAGCAAGGATGGTTCAGTGAAGGGAGCATAATAATAATAACAACTAGGGACAGGCATTTGTTATCATCACATGGTGTATCTGCTGTGTATGAATTCAAATTATTGAGTGATAACGAGTCCCTTGAACTTTTCCTTGAAAAAGCTTTTAAAGAAGAGCATCCTAATGAAGATTATTTGAAACTTGCTAGAACTGTCATTAAGTATGCTGGAGGCCTTCCTTTAGTGCTCACAGTGTTAGGTTCATCTCTTTGCAAAAGAACTATAGTGGAATGGAAAGATGAACTAGCTAAGTTCAAGAAAGTTCCTCCAAAGGACATTTTGAAGATACTTCAAGTGAGTTTTGATGGACTGGATGATCAGGAAAAAACCATATTCTTGGATATTGCTTGCTTTTTCAATGGGATGGACAAAGATCATGTCATACAAATTTTAGAAACTTTGGAGAAGGATCTTCACCCAGAAACTGGGATAAATGTTCTCATTAAGAGATCACTAATAACTAATTATGAAGGGCATTTGTGGGTGCATGAAATTCTCCAAGATATGGGAAAATATATTGTTTATCAAGAATCACCTTATGACGCCGGCAAGCGTTCAAGGATTCCTCTCCCAAGCCTAAAGTCTCTTGATCTATCTCATTCAAAATACCTCATCAAAACCCCAAATTTTGATGGAATTCCTCATCTTGAAAAGTTGATTCTTGAAGGGTGTTCTAACTTGGTTAAAATTCACCAGTCTCTTGGGCAACACAAGAAACTTGTCATTGTTGACTTGAAAGATTGCAAAGAAGTTAAAACCCTTCCAAAAAAATTTGAGATCAATGGCTTGGAGACTTTTATTCTATCGGGTTGTTCAAAAGTTAGAAAACTTCCTGAGTTTGGAAAAGATATGACCCATCTATCGAAGCTTGATTTAGAGAAGACTGGTATAGCCAAACTACCTCAATCACTGGGCAATTTGATTGGCCTCATTGAATTAAATTTGAGGAACTGCAAAAAGCTGGTCTGTCTTCCATGTAGTGTTAATAAGTTGAAAGCTCTCAAAGTTATAAAAATTTCTGAATGCTCAAAGTTTTCAAGGCTGCCAGAGAATTTGAATGAAAATGAAGCTTTGGAAGAGCTGGATTTGAGTGGGATTGCTATAAAAGGGTTATCATTTAGTGACTGCAATGATGAAGCACAATTTTCATCATCATGGAGTTGCTTCTCCCTTCTTCAAAGGCCATCAAGCTCAACAAATTTTATGCTGTTGCCGTCTTTGTCATCATTGACACATTTACGTTTAGTAAACTGCAATCTCCATGATGCATCACTTCCCGATGACATCAGCATGTTATCATCATTGGAAATTTTAGATCTAAGTGGAAACAATTTCATTGACTTACCATCTGGCCTCATTTCCAATCTTTCGAAGCTTAAGGAATGCAATGGAAACAAGTCACCAAGGATGAAAATAAGCAAGTGTGGGTGGCGAGCGGTGTGTAAAGAAGATGTTGAAGCATGGCGAAGAACAGGGGACGAAGGTTGTAGTATCATCAATAACTACGTGAAGATTGATCCAGACATCAACAGTGGAGGTTATAGTCCCCGGCCGAGACCTGATGATACTGTTGTAGAAGTGGATGGCGCCTATTCTCATTTAGATGACAAAGCAGCTTGTGGAGGCGTTCTTAAAGATGGCAACAATTGTATGAAGGAGGCTTTTCTTCTGAAATTAAGTGGCGGAGATATCCTCACAGCCAAACTATGGGGTTGCTTGATGGGTCTCAAAAGCGCTTGGGACGCTGGTACTGGAGATGTTATCTTGAGAAGCGACTCCGCTGAGGCTGTTCGATTGATCAAATTTGAAGTCCCTGAGACGCACAAGGATATTGCTCTCATCATGGAAATCAAAGGGATGTTAGAGTGGGATTGGTTTGTGGATATCCAGGTCTTTCACAGAGACGGCAATGGCATTGCTGAATTACTTGCTAAAAGAGCACTTAATGGGGCAATGGGTCTGCAAATACTGGGCCCCAGACAATGA 2118 0.3919 MGLIKRKLTDKKILLVLDDVSDIRQLENLAPKQGWFSEGSIIIITTRDRHLLSSHGVSAVYEFKLLSDNESLELFLEKAFKEEHPNEDYLKLARTVIKYAGGLPLVLTVLGSSLCKRTIVEWKDELAKFKKVPPKDILKILQVSFDGLDDQEKTIFLDIACFFNGMDKDHVIQILETLEKDLHPETGINVLIKRSLITNYEGHLWVHEILQDMGKYIVYQESPYDAGKRSRIPLPSLKSLDLSHSKYLIKTPNFDGIPHLEKLILEGCSNLVKIHQSLGQHKKLVIVDLKDCKEVKTLPKKFEINGLETFILSGCSKVRKLPEFGKDMTHLSKLDLEKTGIAKLPQSLGNLIGLIELNLRNCKKLVCLPCSVNKLKALKVIKISECSKFSRLPENLNENEALEELDLSGIAIKGLSFSDCNDEAQFSSSWSCFSLLQRPSSSTNFMLLPSLSSLTHLRLVNCNLHDASLPDDISMLSSLEILDLSGNNFIDLPSGLISNLSKLKECNGNKSPRMKISKCGWRAVCKEDVEAWRRTGDEGCSIINNYVKIDPDINSGGYSPRPRPDDTVVEVDGAYSHLDDKAACGGVLKDGNNCMKEAFLLKLSGGDILTAKLWGCLMGLKSAWDAGTGDVILRSDSAEAVRLIKFEVPETHKDIALIMEIKGMLEWDWFVDIQVFHRDGNGIAELLAKRALNGAMGLQILGPRQ 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5074g00010 705 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 159 IPR027417 -
Pral5074g00010 705 Pfam Reverse transcriptase-like 571 691 IPR002156 GO:0003676|GO:0004523
Pral5074g00010 705 SUPERFAMILY Ribonuclease H-like 566 694 IPR012337 -
Pral5074g00010 705 Gene3D - 1 59 IPR027417 -
Pral5074g00010 705 CDD RNase_H_like 571 689 IPR044730 -
Pral5074g00010 705 SMART LRR_typ_2 476 499 IPR003591 -
Pral5074g00010 705 SMART LRR_typ_2 328 351 IPR003591 -
Pral5074g00010 705 SMART LRR_typ_2 451 475 IPR003591 -
Pral5074g00010 705 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 236 401 IPR044974 GO:0006952
Pral5074g00010 705 Gene3D Ribonuclease Inhibitor 435 538 IPR032675 -
Pral5074g00010 705 PRINTS Disease resistance protein signature 232 248 - -
Pral5074g00010 705 PRINTS Disease resistance protein signature 100 114 - -
Pral5074g00010 705 PRINTS Disease resistance protein signature 7 21 - -
Pral5074g00010 705 Gene3D - 65 149 IPR042197 -
Pral5074g00010 705 Pfam NB-ARC domain 4 132 IPR002182 GO:0043531
Pral5074g00010 705 Gene3D - 567 694 IPR036397 GO:0003676
Pral5074g00010 705 Gene3D Ribonuclease Inhibitor 227 414 IPR032675 -
Pral5074g00010 705 ProSiteProfiles Leucine-rich repeat profile. 478 499 IPR001611 GO:0005515
Pral5074g00010 705 SUPERFAMILY L domain-like 234 505 - -
Pral5074g00010 705 SUPERFAMILY "Winged helix" DNA-binding domain 136 222 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5074g00010 Pral-Chr5074 224054 227475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5074g00010 1 497 WRKY Transcription Factor Family AT5G45050 27.470 1.85e-38 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5074g00010 - - pcin:129317383 552.362