Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5074g00004 ATGGCAGTGATTGTGACATCAATCAGGTCAAAGCTTGCAGAATATTTGGTGGCTCCAATTTCACAAGGAGCTACTTATTTGTTCTGCTTCAAGCAGTTCATTGGAGGTGTTGATAAAGCAAAACAAGAGCTCGAGGCAAAACTAGAAGACGTGAAAAAGCGCAAGGAAGAAGCTGACCGAAAAACTGAAGAAATAATGCCATCTGTGAAGAAGTGGTTGGATGATGTGAATGCAATCCTAGAAGAGGAGCAAAAGCTGCAACAAGAGCTTGAAGGAGGACGAAACAAGTGTTTTAATGTGTCACTCAGATATTCTTTAGCAAAACGAATGGAAAATAAGGCTAAGCAAATGATAGATCTCAAACAAAATTCCAGCTTTGAGCCATTTTCTCAACTGATCCAGCTTCCTGGCATTCCTGACCTCTCTTCCAAAGAGTTTATGGATTTCAACTCAAGGAAATCAACTTATGATCGTCTTTTGGAGGCAATTATAGATGGCAAAAACAAGATGGTGGGGCTGTATGGTATAGGGGGCTCAGGCAAAACAACTTTGGCAAAGAAAGTGGGCAAGAAAGTGGATGAGTTGAAGCTTTTTGACAAGGTCGTCATAGCAGTCGTTTCTAAACGCCCAAATATTCTGAACATTCAGCAAGAAATAGCAGAGCAAATAGGCTTGCAATTTAAAGAGGCAACTCAAAGTAATAGAGCACAAAGGCTCTCAGAGGGATTGAAAAATAAGAAGATTCTTATAATCTTAGATGATGTATGGGAGTATCTAAGGCTTGAAGATATTGGCATTCCACCATTTGGGGGTTGTCACATCTTGTTAATCACTCGCCTTCGAGATGTATGTGTCTCTATGGATTGTGAAAGTAAAATTGAGCTGCCTCTCTTAACAGAGGATGAGGCATGGGTTTTGTTCAAGATGCGTGCTAACGCAACCAATGTCTCAACGAATGAGTTCGATAGCATCGGAAGGAAGATTGCTTATGAGTGTAAGGGTTTGCCTATATCAATTGTAACAATTGGAAGCACATTAAAAGAAAAGAGTATTCATACGTGGAGATCAACACTAGAAAGGCTACTACGTCCCCCACCACATGATATTGAAGATGATTTGAAGACCCCTTATGTAACTCTCAAAGTAAGTTATGATAATTTGCCTAGTCCGCTAGCTAAGTCGCTCTTCATATTGTGCTCTATCTTTCCCGAGGATCATGAAATCCATATAGAGGATTTAATTCGTTTTGGCAAAGGGACTCCTGAGCTTGGTGAAAGAATTTACACAATGGAAGAAACAAGGAATAGGGTTTTAGCTAACATTGAGAAATTGTTAGATTCTTGTTTGTTAATGCATACCAGTAAGCAGGCACATGTAAAATTGCATGATGTGATTCGAGATGTAGCCTTGTGGATTGCGAAGAAGCAATATCAAAAAGTTCTAGTGGACAACCAAGAAATTTCAAAGATGTTAATTGATAACCACCAAAGTTTGAAAGATACAAAGGCAGTGTCCTTGTGGAATTTGGATAAGGGTTTTGAGCTCTCTAAACAATTGCATTTTCCAAAACTTGAGATTCTGCTACTTCAACCTTATGGGTTCATTCAAGATATTGGAGCAATGGAGTCACTCAAAGTCTTGGCACTCATAAGACATGCATTTGAGTGGGAATTGCGGTGGTGGTATCCAACATTTGGTTCAATTCCACAATCAATTGTATCATTAACAAATCTTCACACCGTATGCCTTAGAGGGAAAATTTTGGGGGACATATCTCTTTTGGGTGAACTTAAAAGATTGGAGATTCTTGACTTACGTGGTTCTCGATTTGATGAATTACCTGCTGGAATTGTAGATATGAAAATGCTGAAACTTTTGGATATATTTGGTTGTCAAATTGAGAAAAGCCCTTTAGAAGTAATTGGAAGATGTGAGCAGCTTGAAGAATTATACTTTTGGGACCACAAATCTGTCATCCCCAGAAATTCTCTCTCTTTCAAATTTGAAGAGGAAATAATTATAAGCAATTGCTCTGAATTTGAGAGGCTCATTGATGAAGAAGCTACACATGGGGATCCACTATTTCATGATAAGCAACATCATCCATATGGAAAGGAAACTGACAGTGCTTATGTGGGCATTACAACAAAAAGATTCAATCAGTTGCAAAATCAGCAATCCTTGATCCTTTTTCTCAGGTTGAACAGTCTACAAATTAGAAGGAGTGGAAAAAAGAAAGAGTTTATATTCATAGCCAATTGCTCTGAATTAGAGGGGCTTATTGGTGAAGAAGCTGCACATGGGGATCCACTACTTCATGATATGCAAGATCATCCACAGAAACACGGGAACGACATAGTGAGGGTGGTGAAGTCAGAATTGTATTCGCTATCATTACTTGATCTACCAGAATTAGAATATATTTGGAAGGGCCCCACCCAAATTTTGAGCCTCCATAGACTTGAAAGCATTACATTGAGGGAATGCCCAAGATTAAGAAATATGTTCACTCTTGCTATTGTTACAAGCTTTCCAGAGTTGAGGAGACTTTATGTAAGAGGATGCGATGAAATGGAGGGAATATTTTGTGAAGAGTCACTTAAGAATCTGTCTACTACTTCCACTCTTTGCTTCCCCAAACTTGAGACCATTTTTATATCTCGTTGTCACAATGTGAGAAGAGTGTTCTCATATTCTCTGGCATCTCATTGTCCTTCATTGAAGCAAATAATTATAGAGAATTGCTGTGAATTGGAGGCGGTTGTCGAAGCCTATGAAGGTGAAGTAGCTGCTCATCATCCAAGGCTGTTTCCGAAACTGAATAATTTGGATCTCAGGAAGTTGCCAAAGTTGAAAGAGATTTATGAAGGTTATGAATTCAACCACCTTTCTGGTACTATAACAATAGAAGATTGTCCAAACATATCAAAAATCTAA 2937 0.3868 MAVIVTSIRSKLAEYLVAPISQGATYLFCFKQFIGGVDKAKQELEAKLEDVKKRKEEADRKTEEIMPSVKKWLDDVNAILEEEQKLQQELEGGRNKCFNVSLRYSLAKRMENKAKQMIDLKQNSSFEPFSQLIQLPGIPDLSSKEFMDFNSRKSTYDRLLEAIIDGKNKMVGLYGIGGSGKTTLAKKVGKKVDELKLFDKVVIAVVSKRPNILNIQQEIAEQIGLQFKEATQSNRAQRLSEGLKNKKILIILDDVWEYLRLEDIGIPPFGGCHILLITRLRDVCVSMDCESKIELPLLTEDEAWVLFKMRANATNVSTNEFDSIGRKIAYECKGLPISIVTIGSTLKEKSIHTWRSTLERLLRPPPHDIEDDLKTPYVTLKVSYDNLPSPLAKSLFILCSIFPEDHEIHIEDLIRFGKGTPELGERIYTMEETRNRVLANIEKLLDSCLLMHTSKQAHVKLHDVIRDVALWIAKKQYQKVLVDNQEISKMLIDNHQSLKDTKAVSLWNLDKGFELSKQLHFPKLEILLLQPYGFIQDIGAMESLKVLALIRHAFEWELRWWYPTFGSIPQSIVSLTNLHTVCLRGKILGDISLLGELKRLEILDLRGSRFDELPAGIVDMKMLKLLDIFGCQIEKSPLEVIGRCEQLEELYFWDHKSVIPRNSLSFKFEEEIIISNCSEFERLIDEEATHGDPLFHDKQHHPYGKETDSAYVGITTKRFNQLQNQQSLILFLRLNSLQIRRSGKKKEFIFIANCSELEGLIGEEAAHGDPLLHDMQDHPQKHGNDIVRVVKSELYSLSLLDLPELEYIWKGPTQILSLHRLESITLRECPRLRNMFTLAIVTSFPELRRLYVRGCDEMEGIFCEESLKNLSTTSTLCFPKLETIFISRCHNVRRVFSYSLASHCPSLKQIIIENCCELEAVVEAYEGEVAAHHPRLFPKLNNLDLRKLPKLKEIYEGYEFNHLSGTITIEDCPNISKI 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5074g00004 978 Gene3D Ribonuclease Inhibitor 472 693 IPR032675 -
Pral5074g00004 978 Gene3D Ribonuclease Inhibitor 792 978 IPR032675 -
Pral5074g00004 978 SUPERFAMILY L domain-like 461 956 - -
Pral5074g00004 978 PRINTS Disease resistance protein signature 332 346 - -
Pral5074g00004 978 PRINTS Disease resistance protein signature 242 256 - -
Pral5074g00004 978 PRINTS Disease resistance protein signature 595 611 - -
Pral5074g00004 978 PRINTS Disease resistance protein signature 170 185 - -
Pral5074g00004 978 FunFam Probable disease resistance protein At1g61300 142 292 - -
Pral5074g00004 978 Gene3D - 297 382 IPR042197 -
Pral5074g00004 978 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 399 IPR027417 -
Pral5074g00004 978 SMART AAA_5 167 310 IPR003593 GO:0016887
Pral5074g00004 978 Gene3D - 136 295 IPR027417 -
Pral5074g00004 978 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 845 976 - -
Pral5074g00004 978 Coils Coil 34 64 - -
Pral5074g00004 978 Pfam NB-ARC domain 156 386 IPR002182 GO:0043531
Pral5074g00004 978 Coils Coil 69 96 - -
Pral5074g00004 978 Gene3D - 383 470 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5074g00004 Pral-Chr5074 135159 143726 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5074g00004 169 647 WRKY Transcription Factor Family AT5G45050 22.744 4.31e-09 58.9