Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5074g00002 ATGGCGGAGATTGTGACATCAATCGGGTCAAAGCTTGCAGAATATTTGGTGGCTCCAATTTCACAAGGAGCTACTTATTTGTTCTGCTTCAAGCAGTTCATTGGAGGTGTTGATAAAGCAAAACAAGAGCTGGAGGCAAAACTAGAAGACGTGAAAAAGCGCAAGGAAGAAGCTGACCGAAAAACTAAAGAAATAATGCCATCCGTGAAGAAGTGGTTGGATGATGTGAATGCAATCCTAGAAGAGGTGCAAAAGCTACAACAAGAGCTTGAAGGAGGACGAAACAAGTGTTTTAATGTGTCACTCAGATATTCTTTAGCAAAACGAATGGAAAATAAGGCTAAGCAAATGATATATCTCAAACAAAATTCCAGCTTTGAGCCATTTTCTCAACTGATCCAGCTTCCTGGCATTCCTGACTTCTCTTCCAAAGAGTTTATGGATTTCAACTCAAGGAAATCAACTTATGATCGTCTTTTGGAGGCAATTATAGATGGCAAAAACAAGATGGTGGGGCTGTATGGTATAGGGGGCTCAGGCAAAACAACTTTGGCAAAGAAAGTGGGCAAGAAAGTGGATGAGTTGAAGCTTTTTGACAAGGTCATCATAGCAGTCGTTTCTAAACCCCCAAATATTCTGAACATTCAGCAAGAAATAGCAGAGCAAATAGGCTTGCAATTTAAAGAGGCAATTCAAAGTAATAGAGCACAAAGGCTGTCAGAGGGATTGAAAAATAAGAAGATTCTTATAATCTTAGATGATGTATGGGAGTATCTAAGGCTTGAAGATATTGGCATTCCAACAGTTGGAGGTTGTCATATCTTGTTAACCACTCGCCTTCAAGATGTATGTGTCTCTATGGATTGTGAGAGTAAAATTGAGTTGCCACTTTTACCAGAGGAAGAGGCATGGTCATTGTTCAAGATGCGTGCTAACATAACCAATGTCTCAAGGAATGAGTTTGATAGCATTGGAAGGAAGATTGTTGATGAGTGTAAGGGTTTGCCTATAGCAATTGTAACAGTGGGAAGGACATTAAAAGGAAAGGGAATTCATGCATGGAGATCAACTCTAGAAAGGCTACTACATCCCCCACCATTGGATATTGAAGATGATTTGAAGAACCCTTATGTAATTCTCAAAGTAAGTTATGATAATTTGTCGAGTCAGCTAGCTAAGTCACTCTTCATATTGTGCTCTATGTTTCCTGAGGATCATGAAATTCATATAGAGGATTTAATTCGTTTTGGCAAAGGGACTCTTAAACTTGGTGAATGA 1278 0.392 MAEIVTSIGSKLAEYLVAPISQGATYLFCFKQFIGGVDKAKQELEAKLEDVKKRKEEADRKTKEIMPSVKKWLDDVNAILEEVQKLQQELEGGRNKCFNVSLRYSLAKRMENKAKQMIYLKQNSSFEPFSQLIQLPGIPDFSSKEFMDFNSRKSTYDRLLEAIIDGKNKMVGLYGIGGSGKTTLAKKVGKKVDELKLFDKVIIAVVSKPPNILNIQQEIAEQIGLQFKEAIQSNRAQRLSEGLKNKKILIILDDVWEYLRLEDIGIPTVGGCHILLTTRLQDVCVSMDCESKIELPLLPEEEAWSLFKMRANITNVSRNEFDSIGRKIVDECKGLPIAIVTVGRTLKGKGIHAWRSTLERLLHPPPLDIEDDLKNPYVILKVSYDNLSSQLAKSLFILCSMFPEDHEIHIEDLIRFGKGTLKLGE 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5074g00002 425 Gene3D - 298 388 IPR042197 -
Pral5074g00002 425 Pfam NB-ARC domain 156 386 IPR002182 GO:0043531
Pral5074g00002 425 SMART AAA_5 167 300 IPR003593 GO:0016887
Pral5074g00002 425 FunFam Probable disease resistance protein At1g61300 141 292 - -
Pral5074g00002 425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 399 IPR027417 -
Pral5074g00002 425 Coils Coil 34 64 - -
Pral5074g00002 425 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 39 417 - -
Pral5074g00002 425 Coils Coil 69 96 - -
Pral5074g00002 425 Gene3D - 139 295 IPR027417 -
Pral5074g00002 425 PRINTS Disease resistance protein signature 242 256 - -
Pral5074g00002 425 PRINTS Disease resistance protein signature 332 346 - -
Pral5074g00002 425 PRINTS Disease resistance protein signature 170 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5074g00002 Pral-Chr5074 67157 68434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5074g00002 169 349 WRKY Transcription Factor Family AT5G45050 28.571 1.17e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5074g00002 - - pcin:129306241 575.474