Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5073g00001 ATGGCAGAGATTGTGATATCAATCGGGTCAAAGCTTGCAGAATATTTGGTGGCTCCAATTTCACAAGGAGCTACTTATTTGTTTTGCTTCAAGCAGTTCATTGGAGGTGTTGAGAAAACAAAACAAGAGCTGGAGGCAAAACTAGAAGACGTGAAAAAGCGTAAAGAAGAAGCTGATCGAAAAACTGAAGAAATAATGCCATCCGTGAAGAAGTGGTTGGACGATGTGAATGCAATCCTAGAAGAGGTGCAAAAGCTGCAACAAGAGCTTGAAGGAGGACCAAACAAGTGTTTTAATGTGTCACTCAGATATTCTTTAGCAAAACGAATGGAAAATAAAGCTAAGCAAATGACAGATCTCAAACAAAATTCTAGCTTTGAGCCATTTTCCCAACTGATCCAACTTCCTGGCATTACTTACTTCTCTTCCAAAGAGTTTATGGCTTTCAACTCAAGGAAATCAACTTATAATCGTCTTTTGGAGGCAATTATAAATGGCAAAAACAAGATGGTGGGACTATATGGTATAGGGGGCTCAGGCAAAACCACTTGGGCAAAAGAAGTGGGCAAGAAAGTGGATGAGCTGAAGCTTTTTGACAATGTCATCATGGTAGTTGTTTCTAAACCCCTAAATATTCTTAACATTCAGCAGGAAATAGCAGGGCAAATAGGCTTACAACTTCAAGAGCCAACTCAACTTACTAAAGCACAAAGGCTGTCAGAAGGATTGAAAAATAAGAAGATTCTTATAATCTTGGATGATGTGTGGAGCAAACTAAAGCTTGAAGATATTGGAATTCCAACCACTGGAGGTTGTCATATCTTGTTGACCACTCGCCTTCGAGATGTATGTGTCTCTATGGATTGTGAGAGTAAAATTGAGTTGTCTCTCTTAACAGAGGAAGAGGCATGGGCTTTGTTCAAGATGCATGCTAACACAACTAGTGTGTCAACGAATGAGTTCGATAGCATCGGAAGGAAGATTGTTGATGAGTGTAAGGGTTTGCCTATAGCAATTGTAACAGTTGGAAGCACATTAAAAGAAAAGAGTATTCATACGTGGAGATCAACATTAGAAAGGCTACGACATCCCCCACCACTGGATATTGAAGATGATTTGAAGACCCCTTATGTAACTCTCAAAGTAAGTTATGATAATTTGTCGAGTCCGCTAGCTAAGTCGCTCTTCATATTGTGCTCTATGTTTCCTGAGGATCATGAAATCCATATAGAGGATTTAATTCGTTTTGGCAAAGGGACTCTTAAGCTTGGTGAAAGAATTTACACAATGGAGAAAACAAGGAATAGGGTTTTAGCTAACATTGAGAAATTGTTAGATTCTTCTTTGTTAATGCATACCAGTAAGCAGGCACATGTAAAATTGCATGATGTGGTTCGAGATGTAGCCTTGTGGATTGCAAAGGAGCAATGTCAAGAAGTTCTGGTGGACAACCAAGAAATTTCAGAGATGTTAATTGGTAACCACCAAAGTTTGGAAGATACAAAGGCAGTGTCATTGTGGAATTTGGATGAGGATCTCGAGCTCTCTAAACAATTGCATTTTCCAAAACTTGAGATTCTACTACTTCAACCATATGGGTTCATTCGAGATATTGGAGCAATGGAGTCACTCAAAGTCTTGGCACTCATAAGACATGGATTTGAGTGGGAATTGCGGAGGTGGGATCCAACTTTTTGTTCAATTCCACAATCAATTGTATCATTAACTAATCTTCACACCTTATGCCTTAGAGGGAAAAATTTGGGGGACATATCTCTTTTGGGTGAACTTAAAGGATTGGAGATTCTTGACTTACGTGGTTCTCGATTTGCTGAATTACCTATTGGAATTGTAGATATGAAAATGCTGAAACTTTTGGATATATTTGGTTGTCAAATTGAGAAAAGCCCTTTAGAAGTAATTGGAAGATGTGAGCAGCTTGAAGAATTATACTTTTGGGACCACAAATCTGTCATCCCAGAAATTCTCTCTCTTTCAAATTTGAAGAGGTATGTTATCTATGATTCCAGATTAATTTATGAATATTTGGATGACTCTTTTCAACAATATTTGGATGGTTGTGATGAAGCATTAAGAGCTTTATGTATACAAGGCTTTAGAGTCTCTACTTTGAATGCATCAATGAAAGATCTCATTCTTAGAGCAAACCACCTTTGGCTAGATAACTGTGAGTGGGATTATAAAGATACAAATTTTCAGATAAAGCACTTAGTGGTATCATGCTGTCAAGAGAAAAGATTCATCATCAAGAACCCTGATGTGAACATTCTTCAAACACAACAAGTATTCTCACGCTTGATCACTTTAACATTGTTTGAAATGAATAGTCTTGAACAAGTGTTTCAAGATTCGTCTATTGGCTGCTCTCTCCCCATGTTACAAGAGCTATGGATACGGAGTTGTCCTGAATTGAGAATCTGTATCTTCTCGCATGCCACCATTACGAGCCTGCCAAAGTTGAGAAAACTTCGTATTTATCGTTGTGACAAAGTGAAATGGCTATTGTCTTGTTCCCTAGCTTCTTATTGTCCTTTACTGAAGGAAATAATTATAAGCAATTGCTCTGAATTTGAGAGGCTCATTGATGAAGAAGCTGCACATGGGGATCCACTACTTCATGATAAGCAATATTATCCATATGGAAAGGAAAATGATAGTGCTTATGTGGGCGTTATAGCAAAAAGGTTCAATCAGTTGCAAAATGAGCAATCCTTGATCCTTTTTCTAAGGTTGAAAAGTCTAGAAATTGAAAGGAGTGGAAAAAAGAAAGGTATAATGGAAATCCAAGTCAGAGGAAGAATAGAAGATGATGAAGAATCTATTAAAGCCCAAGAACCTCTAAAGCTGGATTCAGAGTTGAGTGAATTAAAATTAGATGTTCTACCAGAATTGGAATATATTTGGAAGGGCCCCACCCAAATTGTGAGCCTCCACAGACTTGAAGATATTTCACTAACAGATTGTCCAAAATTGAAAAGTATTTTCACTCTAGCTATTGTTGCAAGCCTTCCAGAGTTGAGAAGACTTGTAGTAGATAACTGCCAGGAATGGGAGGGAATATTTTGTGAAGAATCACTCAAAAACCTCTCTTCTTCTAATATTTGCTTCCCCAAACTTAAGAAGATTAACATATATAATTGCAACAAAGTGAGATGGTTGTTATCTTATTCTCTGGCATCTCATTGTCCTTCACTAGAGTTCATATACATAGACAGTTGCTCTGAATTTGAGGGGCTTATTGGTGAAGAAGCTGCACATGGGGATCCACTACTTCATGATATGCAAGATCATCCACAGCAACCTTTGATTCGAAATTGTTCTGAACTTGAGAGGCTTGTTGAAGAAGCATCATATGGGGATCGGCTACCACTTCTCAAACTGAAGTACTTACGCTTGTTGTCATTGCCGAAATTGAGAGAGATCTTCTCTCACAAACATGAGAATGATAAAATGAGAGCGGTAAAGTCAGAATTGTGTTCTACATGGTTAGAAGATCTACCGGAATTAGAATATATCTGGAAAGATCCCATACAAATTTTGAGCTTCTATAGACTTGAAGAGATTACACTGTTGGAATGTCCGAGATTAAGAAATATATTCACTGTTGCTGTCGTTACAAGCCTTCCAGAGTTGAGGGAACTTGATGTAAACGGATGCAATGAATGGGAGGGAATATTTTGTGAAGAGTCACTTAAGAATCTGTCTACTACTCCCACTCGTTGCTTCCCCAAACTTGAGACCATTTTTATATCTCGTTGTCACAAAGTGAGAAGGGTGTTCTCATATTCTCTGGCATCTCATTGTCCTTCATTGAAGAAATTATATATAGCGAATTGCTGTGAATTGGAGGGGGTTGTTGAAGCTTATGAAGGTGAAGTAGCTGCTCATCATCATCAAAGGCTGTTTCCTGAACTAAATTATTTGAAGCTCAGTAATTTGCCAAAGTTGAGAGAGATTTATGAAGGTTATGAATCCAACCTCCTTTCTGGTACTATAACAATAGAAGATTGTCCAAACATATCAAAAATCTCAAAAATCCCATTAGAAGACAAGCCCTCGTCATCAGGTTCGTAG 4095 0.38 MAEIVISIGSKLAEYLVAPISQGATYLFCFKQFIGGVEKTKQELEAKLEDVKKRKEEADRKTEEIMPSVKKWLDDVNAILEEVQKLQQELEGGPNKCFNVSLRYSLAKRMENKAKQMTDLKQNSSFEPFSQLIQLPGITYFSSKEFMAFNSRKSTYNRLLEAIINGKNKMVGLYGIGGSGKTTWAKEVGKKVDELKLFDNVIMVVVSKPLNILNIQQEIAGQIGLQLQEPTQLTKAQRLSEGLKNKKILIILDDVWSKLKLEDIGIPTTGGCHILLTTRLRDVCVSMDCESKIELSLLTEEEAWALFKMHANTTSVSTNEFDSIGRKIVDECKGLPIAIVTVGSTLKEKSIHTWRSTLERLRHPPPLDIEDDLKTPYVTLKVSYDNLSSPLAKSLFILCSMFPEDHEIHIEDLIRFGKGTLKLGERIYTMEKTRNRVLANIEKLLDSSLLMHTSKQAHVKLHDVVRDVALWIAKEQCQEVLVDNQEISEMLIGNHQSLEDTKAVSLWNLDEDLELSKQLHFPKLEILLLQPYGFIRDIGAMESLKVLALIRHGFEWELRRWDPTFCSIPQSIVSLTNLHTLCLRGKNLGDISLLGELKGLEILDLRGSRFAELPIGIVDMKMLKLLDIFGCQIEKSPLEVIGRCEQLEELYFWDHKSVIPEILSLSNLKRYVIYDSRLIYEYLDDSFQQYLDGCDEALRALCIQGFRVSTLNASMKDLILRANHLWLDNCEWDYKDTNFQIKHLVVSCCQEKRFIIKNPDVNILQTQQVFSRLITLTLFEMNSLEQVFQDSSIGCSLPMLQELWIRSCPELRICIFSHATITSLPKLRKLRIYRCDKVKWLLSCSLASYCPLLKEIIISNCSEFERLIDEEAAHGDPLLHDKQYYPYGKENDSAYVGVIAKRFNQLQNEQSLILFLRLKSLEIERSGKKKGIMEIQVRGRIEDDEESIKAQEPLKLDSELSELKLDVLPELEYIWKGPTQIVSLHRLEDISLTDCPKLKSIFTLAIVASLPELRRLVVDNCQEWEGIFCEESLKNLSSSNICFPKLKKINIYNCNKVRWLLSYSLASHCPSLEFIYIDSCSEFEGLIGEEAAHGDPLLHDMQDHPQQPLIRNCSELERLVEEASYGDRLPLLKLKYLRLLSLPKLREIFSHKHENDKMRAVKSELCSTWLEDLPELEYIWKDPIQILSFYRLEEITLLECPRLRNIFTVAVVTSLPELRELDVNGCNEWEGIFCEESLKNLSTTPTRCFPKLETIFISRCHKVRRVFSYSLASHCPSLKKLYIANCCELEGVVEAYEGEVAAHHHQRLFPELNYLKLSNLPKLREIYEGYESNLLSGTITIEDCPNISKISKIPLEDKPSSSGS 1364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5073g00001 1364 Coils Coil 69 89 - -
Pral5073g00001 1364 Gene3D - 297 382 IPR042197 -
Pral5073g00001 1364 Pfam NB-ARC domain 156 386 IPR002182 GO:0043531
Pral5073g00001 1364 Gene3D Ribonuclease Inhibitor 683 874 IPR032675 -
Pral5073g00001 1364 Gene3D Ribonuclease Inhibitor 1183 1358 IPR032675 -
Pral5073g00001 1364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 399 IPR027417 -
Pral5073g00001 1364 Gene3D Ribonuclease Inhibitor 896 1091 IPR032675 -
Pral5073g00001 1364 SUPERFAMILY RNI-like 797 1291 - -
Pral5073g00001 1364 Gene3D - 383 468 IPR036388 -
Pral5073g00001 1364 PRINTS Disease resistance protein signature 242 256 - -
Pral5073g00001 1364 PRINTS Disease resistance protein signature 595 611 - -
Pral5073g00001 1364 PRINTS Disease resistance protein signature 170 185 - -
Pral5073g00001 1364 PRINTS Disease resistance protein signature 332 346 - -
Pral5073g00001 1364 FunFam Probable disease resistance protein At1g61300 144 292 - -
Pral5073g00001 1364 Gene3D Ribonuclease Inhibitor 469 680 IPR032675 -
Pral5073g00001 1364 Coils Coil 34 64 - -
Pral5073g00001 1364 SUPERFAMILY L domain-like 461 862 - -
Pral5073g00001 1364 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 906 1084 - -
Pral5073g00001 1364 Gene3D - 142 295 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5073g00001 Pral-Chr5073 21652 30950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5073g00001 152 387 WRKY Transcription Factor Family AT5G45050 27.381 7.34e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5073g00001 - - pcin:129306241 1537.7