Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5072g00002 ATGGAAGCTGAACATGTGCTGAAGAGAAGACTCGAAGAAGTGAAGGAGCGCATGGAACAAGCTGCTCGAAATAGTGAGGAAATAATGCTACCTGTGAAGAACTGGTTGAATGACGTGGAGAAAATTCTAGAGAATGTGCAAGAGTTGCAACAAAAGGCTGAAAAGGAAGGAAAGAGTTGTTTCAACGTGTCTCTCAAGTATTCCTTAGCAAAACAAATGGATAATAACGCAAAGAGGATGATGGAGCTAAAAAAGGAGTCCTACTTTGAGAAAGACCATTTTTCTCATCTAATCCAACTTCCTGACATCACTCACTTCTCTTCCAAAGACTTTGTGGATTTTCAGTCAAGGGAATCTACTTATAAGGATCTTTTGGAGGCAATTAAAGACGAAAAGAACAAGATGATCGGACTCTGTGGTATGGGCGGTTCAGGTAAAACCACTTTGGCAAAAGAAGTAGGCAAGGAAGTGGACAAGATGAAGATTTTTGAAAAGGTCATCATGGTCATTGTTTCGAAACCTCCTCTAAATGTTACAAAAGTTCAGCAAGATATAGCAGAGCAAATAGATTTGAAAATTTCAGATCAAACTCCATTGGCAAGAGCACAAAGGCTGTCAAATCGATTGAAAAATAAGAAGATTCTTATAATCTTGGATGATGTGTGGGAATATCTAAAGCTTGAAGATATTGGCATTCCACTTGTTGAAGGTTGTCAGATCTTGTTAGCAACTCGCCTTCGCAATGTATGTGGCTTTATGGGTTGTAAGACTATTGAACTGCCTTTGATAACTAAGGAGGAGGCCTGGGAATTATTCAAGAAACATGCAAATCTACGCAATGATTCCTCAAATATGTTTGATGACATAGGAAGGAAAATTGTTAATGAGTGCAAGGAGCTACCGATTGCAATAATAATAGTTGGAAGCTCCTTAAAGAGAAAACCTATTAGAGCATGGGAGTCAGCACTAAGAGACTAG 978 0.3885 MEAEHVLKRRLEEVKERMEQAARNSEEIMLPVKNWLNDVEKILENVQELQQKAEKEGKSCFNVSLKYSLAKQMDNNAKRMMELKKESYFEKDHFSHLIQLPDITHFSSKDFVDFQSRESTYKDLLEAIKDEKNKMIGLCGMGGSGKTTLAKEVGKEVDKMKIFEKVIMVIVSKPPLNVTKVQQDIAEQIDLKISDQTPLARAQRLSNRLKNKKILIILDDVWEYLKLEDIGIPLVEGCQILLATRLRNVCGFMGCKTIELPLITKEEAWELFKKHANLRNDSSNMFDDIGRKIVNECKELPIAIIIVGSSLKRKPIRAWESALRD 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5072g00002 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 324 IPR027417 -
Pral5072g00002 325 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 6 324 - -
Pral5072g00002 325 Coils Coil 32 59 - -
Pral5072g00002 325 FunFam Probable disease resistance protein At1g61300 100 257 - -
Pral5072g00002 325 Coils Coil 4 28 - -
Pral5072g00002 325 SMART AAA_5 132 264 IPR003593 GO:0016887
Pral5072g00002 325 Gene3D - 103 260 IPR027417 -
Pral5072g00002 325 PRINTS Disease resistance protein signature 297 311 - -
Pral5072g00002 325 PRINTS Disease resistance protein signature 208 222 - -
Pral5072g00002 325 PRINTS Disease resistance protein signature 135 150 - -
Pral5072g00002 325 Gene3D - 263 325 IPR042197 -
Pral5072g00002 325 Pfam NB-ARC domain 122 321 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5072g00002 Pral-Chr5072 68249 69226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5072g00002 134 315 WRKY Transcription Factor Family AT5G45050 26.289 9.43e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5072g00002 - - pcin:129306241 353.984