Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5071g00003 ATGGATGAGCATAGTCGAGGAAAGGAATTTGAAAAGTTGAGGAGGAGATTTGAGAGGAAAGCTCAAAGAGTATTGCAAGAGCAAGTCTTAAAATTGGAAAGAGAAGCAGAGGATGCATCAGCTTTATCGTTAGTGAAGGAGACGCCACAACTTGGATCACCTGGAACAATCTGGACACCAAGAAGACAATCTTTTGCCCATTTTGAAGATTTTAAGAAGTCTAGCCATGCGCGAATGAAAGGTCATGCATTTAATACTCTGAGCCTTCAGAAACATGAGAGACAGATTTTACATCAAACTGAGGAGTTGAAGGCAAAGAATGCAAAGAAGAGTGAGGCACTTCAAGTGAGCGGAGAAATCCAAAGGAGGAAATCAAAGAACAGCACCAAGGTCAAAGTATTTTCTCCAAGGATGGGCTCCAATGTTGAAACATGTAAAATAAAGGCTATAGAAGAGATGAGAAAAGCGAAACTAAAGATGAAGAAAGCAAAGGAGAAAATCAGGGAGGGAAAGCAAGGCTTAGATAGCTTTGCCGTGGTAAAGTTTTCATTGGACCCACAACAAGACTTCAGAGATTCAATGGTTGAGATGATCAGAGAGAAGCAGATCAGCCAGCCAGAGGAAATGGAAGAGCTTTTAGCATGTTATCTGACTTTGAATTCTGATGAATACCATGATCTCATCATCAAGGTATTTCGGCAGGTATGGTTCAACATGAACTTAGATAGTAAGGGTATTAAGTTAAACAAGTAA 753 0.4011 MDEHSRGKEFEKLRRRFERKAQRVLQEQVLKLEREAEDASALSLVKETPQLGSPGTIWTPRRQSFAHFEDFKKSSHARMKGHAFNTLSLQKHERQILHQTEELKAKNAKKSEALQVSGEIQRRKSKNSTKVKVFSPRMGSNVETCKIKAIEEMRKAKLKMKKAKEKIREGKQGLDSFAVVKFSLDPQQDFRDSMVEMIREKQISQPEEMEELLACYLTLNSDEYHDLIIKVFRQVWFNMNLDSKGIKLNK 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5071g00003 250 Coils Coil 89 109 - -
Pral5071g00003 250 ProSiteProfiles OVATE domain profile. 179 238 IPR006458 -
Pral5071g00003 250 Coils Coil 146 173 - -
Pral5071g00003 250 Pfam Transcriptional repressor, ovate 183 239 IPR006458 -
Pral5071g00003 250 NCBIfam uncharacterized plant-specific domain TIGR01568 178 239 IPR006458 -
Pral5071g00003 250 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 85 239 IPR038933 GO:0045892
Pral5071g00003 250 Coils Coil 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5071g00003 Pral-Chr5071 34381 35387 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pral5071g00003 Ovate 1.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5071g00003 - - gmx:102666239 227.254